RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 KIAA0355O15063 1070 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 LSM8O95777 96 aaKnown RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 CYP11A1P05108 521 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 CYP1A2P05177 515 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 KRT19P08727 400 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 VDRP11473 427 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 KRT5P13647 590 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 PRLRP16471 622 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GNA15P30679 374 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 RFC2P35250 354 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 MLH1P40692 756 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TAF6P49848 677 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 AFF1P51825 1210 aaKnown RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TERF1P54274 439 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 CDH8P55286 799 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GSCP56915 257 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 LILRA4P59901 499 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GNG11P61952 73 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 NOMO3P69849 1222 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 DSC1Q08554 894 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 PTP4A2Q12974 167 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GRIK3Q13003 919 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TUBB2AQ13885 445 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 CNGA2Q16280 664 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 UPP1Q16831 310 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SOWAHAQ2M3V2 549 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TRIM60Q495X7 471 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SV2CQ496J9 727 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GLRA4Q5JXX5 417 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 PAPD7Q5XG87 772 aaKnown RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SYT10Q6XYQ8 523 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SLFN11Q7Z7L1 901 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 PHF13Q86YI8 300 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 WDTC1Q8N5D0 677 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TOP6BLQ8N6T0 577 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 LRRC57Q8N9N7 239 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SLC4A11Q8NBS3 891 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 DBF4BQ8NFT6 615 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TRIM58Q8NG06 486 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 KIF18AQ8NI77 898 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 KBTBD7Q8WVZ9 684 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 RFFLQ8WZ73 363 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SEPT8Q92599 483 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SECISBP2LQ93073 1101 aaKnown RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TMEM176AQ96HP8 235 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 ZNF560Q96MR9 790 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 UROC1Q96N76 676 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TUBB2BQ9BVA1 445 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 APOL6Q9BWW8 343 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 ELOVL4Q9GZR5 314 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 SMYD3Q9H7B4 428 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 RSAD1Q9HA92 442 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 ABCB6Q9NP58 842 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TMEM161AQ9NX61 479 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TAS2R14Q9NYV8 317 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 KANSL3Q9P2N6 904 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 NXF1Q9UBU9 619 aaKnown RBP7.05□□□□□ -1.28
ATG4A-207ENST00000474825 GTF3C4Q9UKN8 822 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TFR2Q9UP52 801 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 NME7Q9Y5B8 376 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 NR2E3Q9Y5X4 410 aa7.05□□□□□ -1.28
ATG4A-207ENST00000474825 TCRBV5S1A1TA0A578 114 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 M0QZQ0 153 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 O00370 1275 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 GDF9O60383 454 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 PQBP1O60828 265 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 FTLP02792 175 aaPredicted RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 CFHP08603 1231 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 MYBL1P10243 752 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 MMP8P22894 467 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 WARSP23381 471 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 USP8P40818 1118 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 RPL34P49207 117 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 SCNN1GP51170 649 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 TNNC1P63316 161 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 GPC5P78333 572 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 AMPD2Q01433 879 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 TUSC3Q13454 348 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 STILQ15468 1287 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 IFI16Q16666 785 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 TCTN1Q2MV58 587 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 CLLU1OSQ5K130 101 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 ZNF569Q5MCW4 686 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 ARHGAP17Q68EM7 881 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 LCLAT1Q6UWP7 414 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 NUDT18Q6ZVK8 323 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 MON1BQ7L1V2 547 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 NECAB2Q7Z6G3 386 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 GPIHBP1Q8IV16 184 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 RHOT2Q8IXI1 618 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 MCOLN2Q8IZK6 566 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 SLC35F6Q8N357 371 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 DIS3LQ8TF46 1054 aaKnown RBP7.04□□□□□ -1.28
ATG4A-207ENST00000474825 TFAP2BQ92481 460 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 LPPQ93052 612 aa7.04□□□□□ -1.28
ATG4A-207ENST00000474825 CYFIP2Q96F07 1278 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms