RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 ACAT1P24752 427 aaKnown RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 CDR1P51861 262 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 NDST1P52848 882 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 RAD23BP54727 409 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 YWHAHQ04917 246 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 TBX2Q13207 712 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 TJAP1Q5JTD0 557 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 PLPP4Q5VZY2 271 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 OVOS1Q6IE37 1185 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 CEP57Q86XR8 500 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 CRYBG2Q8N1P7 616 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 TMEM86AQ8N2M4 240 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 APPL2Q8NEU8 664 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 SLC22A17Q8WUG5 538 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 FAM122AQ96E09 287 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 NT5C1BQ96P26 610 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 MMS19Q96T76 1030 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 LMAN2LQ9H0V9 348 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 UBE2TQ9NPD8 197 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 FAM207AQ9NSI2 230 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 DNAJC12Q9UKB3 198 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 BARX2Q9UMQ3 279 aaPredicted RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 BDP1A6H8Y1 2624 aa11.08□□□□□ -0.64
CASC3-204ENST00000474190 PRRC2BQ5JSZ5 2229 aaKnown RBP11.08□□□□□ -0.64
CASC3-204ENST00000474190 TSC2P49815 1807 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 PLXNA4Q9HCM2 1894 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 PER2O15055 1255 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 HUS1O60921 280 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 CSPG5O95196 566 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 SEC24AO95486 1093 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 GLP2RO95838 553 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 SERPINC1P01008 464 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 GYPCP04921 128 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 CLCN1P35523 988 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 CLCN4P51793 760 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 ZNF75DP51815 510 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 CACNA2D1P54289 1103 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 TNNC1P63316 161 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 ROR1Q01973 937 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 HYAL1Q12794 435 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 RAB33AQ14088 237 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 PSMD5Q16401 504 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 WDR44Q5JSH3 913 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 INTS6LQ5JSJ4 861 aaKnown RBP11.07□□□□□ -0.64
CASC3-204ENST00000474190 ANKS3Q6ZW76 656 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 TMC7Q7Z402 723 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 VSTM4Q8IW00 320 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 FAM71AQ8IYT1 594 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 PPM1KQ8N3J5 372 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 TTC9BQ8N6N2 239 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 ACBD6Q9BR61 282 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 SYT11Q9BT88 431 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 ANP32EQ9BTT0 268 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 NGRNQ9NPE2 291 aaKnown RBP11.07□□□□□ -0.64
CASC3-204ENST00000474190 DDX43Q9NXZ2 648 aaKnown RBP11.07□□□□□ -0.64
CASC3-204ENST00000474190 CEP72Q9P209 647 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 STK39Q9UEW8 545 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 PUF60Q9UHX1 559 aaKnown RBP11.07□□□□□ -0.64
CASC3-204ENST00000474190 DSEQ9UL01 958 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 CDY1Q9Y6F8 540 aa11.07□□□□□ -0.64
CASC3-204ENST00000474190 COL4A4P53420 1690 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 OR6C75A6NL08 312 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 F8VZ95 297 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 NRG2O14511 850 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 TGM5O43548 720 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 URODP06132 367 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 CFHP08603 1231 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 PDGFRBP09619 1106 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 CD58P19256 250 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 HOXD11P31277 338 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 OR1D2P34982 312 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 GNL1P36915 607 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 PSMC1P62191 440 aaKnown RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 SMC1AQ14683 1233 aaKnown RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 ARID5BQ14865 1188 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 DRAP1Q14919 205 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 DUSP6Q16828 381 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 CTC1Q2NKJ3 1217 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 CTXN3Q4LDR2 81 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 TCEAL5Q5H9L2 206 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 FIGNQ5HY92 759 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 FKBP15Q5T1M5 1219 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 RNF19BQ6ZMZ0 732 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 UNC93AQ86WB7 457 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 C12orf29Q8N999 325 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 DDX1Q92499 740 aaKnown RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 JAKMIP2Q96AA8 810 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 STK33Q9BYT3 514 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 RHOBTB2Q9BYZ6 727 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 FAM124BQ9H5Z6 455 aaPredicted RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 MRPL17Q9NRX2 175 aaKnown RBP11.06□□□□□ -0.64
CASC3-204ENST00000474190 LMCD1Q9NZU5 365 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 ITIH6Q6UXX5 1313 aa11.06□□□□□ -0.64
CASC3-204ENST00000474190 ATG2AQ2TAZ0 1938 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 MTMR11A4FU01 709 aa11.05□□□□□ -0.64
CASC3-204ENST00000474190 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms