RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	TINAGL1	Q9GZM7	467 aa	Predicted RBP	5.66	□□□□□ -1.5
BBX-223	ENST00000473542	REXO4	Q9GZR2	422 aa	Known RBP	5.66	□□□□□ -1.5
BBX-223	ENST00000473542	SPON1	Q9HCB6	807 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	GPRC5B	Q9NZH0	403 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	MYO1A	Q9UBC5	1043 aa		5.66	□□□□□ -1.5
BBX-223	ENST00000473542	ZNF785	A8K8V0	405 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	DIRC3	C9JPN6	131 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	AREL1	O15033	823 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	CYP27B1	O15528	508 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	FOS	P01100	380 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	ANXA2	P07355	339 aa	Known RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	CYP2C9	P11712	490 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	XRCC6	P12956	609 aa	Known RBP eCLIP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	PPM1A	P35813	382 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	SLC11A2	P49281	568 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	ZNF135	P52742	658 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	PSMC1	P62191	440 aa	Known RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	RPS16	P62249	146 aa	Known RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	TNFAIP2	Q03169	654 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	CTBP1	Q13363	440 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	C3orf38	Q5JPI3	329 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	FAM160B1	Q5W0V3	765 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	HIBCH	Q6NVY1	386 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	CATSPERG	Q6ZRH7	1159 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	BEND5	Q7L4P6	421 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	MRGPRG	Q86SM5	289 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	ELOA2	Q8IYF1	753 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	TBC1D15	Q8TC07	691 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	IPCEF1	Q8WWN9	437 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	IQCD	Q96DY2	449 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	TMEM41A	Q96HV5	264 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	SNX22	Q96L94	193 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	KLHL32	Q96NJ5	620 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	MOGAT1	Q96PD6	335 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	SPATA5L1	Q9BVQ7	753 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	ZNF703	Q9H7S9	590 aa	Predicted RBP	5.65	□□□□□ -1.5
BBX-223	ENST00000473542	PTPRH	Q9HD43	1115 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	POGK	Q9P215	609 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542	SLC45A2	Q9UMX9	530 aa		5.65	□□□□□ -1.5
BBX-223	ENST00000473542		F5H423	210 aa	Predicted RBP	5.64	□□□□□ -1.51
BBX-223	ENST00000473542	PYCARD-AS1	I3L0S3	204 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	MYO1C	O00159	1063 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	ADAMTS3	O15072	1205 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	THAP12	O43422	761 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	NCK2	O43639	380 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	UNC5C	O95185	931 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	MT-ND5	P03915	603 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	GRP	P07492	148 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	TYRP1	P17643	537 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	MAK	P20794	623 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	FDXR	P22570	491 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	VIPR2	P41587	438 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	PHKA1	P46020	1223 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	RABGGTB	P53611	331 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	COL10A1	Q03692	680 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	PIGF	Q07326	219 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	HNRNPA0	Q13151	305 aa	Known RBP	5.64	□□□□□ -1.51
BBX-223	ENST00000473542	ARL13B	Q3SXY8	428 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	C4orf46	Q504U0	113 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	MED25	Q71SY5	747 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	SGMS1	Q86VZ5	419 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	RHOT2	Q8IXI1	618 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	GSPT2	Q8IYD1	628 aa	Known RBP	5.64	□□□□□ -1.51
BBX-223	ENST00000473542	CCDC33	Q8N5R6	958 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	DNAJC5G	Q8N7S2	189 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	FANCB	Q8NB91	859 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	RNF169	Q8NCN4	708 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	TMIE	Q8NEW7	156 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	POF1B	Q8WVV4	589 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	CRAMP1	Q96RY5	1269 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	HERPUD2	Q9BSE4	406 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	TMX2	Q9Y320	296 aa		5.64	□□□□□ -1.51
BBX-223	ENST00000473542	REXO2	Q9Y3B8	237 aa	Known RBP	5.64	□□□□□ -1.51
BBX-223	ENST00000473542	GOLGA6L6	A8MZA4	724 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542		E9PLN8	166 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	HNRNPDL	O14979	420 aa	Known RBP	5.63	□□□□□ -1.51
BBX-223	ENST00000473542	ITGB1	P05556	798 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	ABCB4	P21439	1286 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	FGFR2	P21802	821 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	SLC6A2	P23975	617 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	IL6ST	P40189	918 aa	Predicted RBP	5.63	□□□□□ -1.51
BBX-223	ENST00000473542	TEC	P42680	631 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	SLFN5	Q08AF3	891 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	FSTL1	Q12841	308 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	AGAP9	Q5VTM2	703 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	C1QL3	Q5VWW1	255 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	METRNL	Q641Q3	311 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	SLC17A8	Q8NDX2	589 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	VPS37A	Q8NEZ2	397 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	ATXN2L	Q8WWM7	1075 aa	Known RBP	5.63	□□□□□ -1.51
BBX-223	ENST00000473542	KIAA1191	Q96A73	305 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	MED15	Q96RN5	788 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	DCLRE1C	Q96SD1	692 aa	Known RBP	5.63	□□□□□ -1.51
BBX-223	ENST00000473542	PNKP	Q96T60	521 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	VKORC1	Q9BQB6	163 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	CRB3	Q9BUF7	120 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	XPNPEP3	Q9NQH7	507 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	XPR1	Q9UBH6	696 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	NEU2	Q9Y3R4	380 aa		5.63	□□□□□ -1.51
BBX-223	ENST00000473542	CAPN14	A8MX76	684 aa		5.62	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms