RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 PSMG2Q969U7 264 aa24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 ACBD6Q9BR61 282 aa24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 LRRC3Q9BY71 257 aa24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 KCTD10Q9H3F6 313 aa24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 DDX43Q9NXZ2 648 aaKnown RBP24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 CA14Q9ULX7 337 aa24.22■■□□□ 1.47
PTP4A1-203ENST00000473334 KRBA1A5PL33 1030 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 RHOBTB3O94955 611 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 NPR3P17342 541 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 NUBP1P53384 320 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 DPH6Q7L8W6 267 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 ITIH5Q86UX2 942 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 SLC9A9Q8IVB4 645 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 TMEM105Q8N8V8 129 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 CCDC34Q96HJ3 373 aa24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 ABI2Q9NYB9 513 aaPredicted RBP24.21■■□□□ 1.47
PTP4A1-203ENST00000473334 PDXKO00764 312 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 KIF20AO95235 890 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 GJA1P17302 382 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 LHX1P48742 406 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 CDR1P51861 262 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 GPC5P78333 572 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 VEPH1Q14D04 833 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 NFE2Q16621 373 aaPredicted RBP24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 SOWAHAQ2M3V2 549 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 DNAJB7Q7Z6W7 309 aaPredicted RBP24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 OSTM1Q86WC4 334 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 SHKBP1Q8TBC3 707 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 TMEM174Q8WUU8 243 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 ELSPBP1Q96BH3 223 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 ASB16Q96NS5 453 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 GZF1Q9H116 711 aaPredicted RBP24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 ARHGEF3Q9NR81 526 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 TMLHEQ9NVH6 421 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 DMAC2Q9NW81 257 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 PCDHB5Q9Y5E4 795 aa24.2■■□□□ 1.46
PTP4A1-203ENST00000473334 GABRDO14764 452 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 FGF19O95750 216 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 HAPLN1P10915 354 aaPredicted RBP24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 ATF6P18850 670 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 AOC1P19801 751 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 FCARP24071 287 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 PCSK1P29120 753 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 PTPN5P54829 565 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 TEAD2Q15562 447 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 INTS6LQ5JSJ4 861 aaKnown RBP24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 FAM78AQ5JUQ0 283 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 TANGO2Q6ICL3 276 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 LIMS2Q7Z4I7 341 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 FAM200AQ8TCP9 573 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 LPIN3Q9BQK8 851 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 GPR88Q9GZN0 384 aa24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 ZNF334Q9HCZ1 680 aaPredicted RBP24.19■■□□□ 1.46
PTP4A1-203ENST00000473334 A0A1W2PRU2 124 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 GOLGA6L4A6NEF3 574 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 CST3P01034 146 aaPredicted RBP24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 NR3C1P04150 777 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 RFX1P22670 979 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 ACAT1P24752 427 aaKnown RBP24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 NHLH1Q02575 133 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 KCNB1Q14721 858 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 ZNF516Q92618 1163 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 SMARCD2Q92925 531 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 ZSWIM3Q96MP5 696 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 PLA2G2FQ9BZM2 168 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 SLITRK6Q9H5Y7 841 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 ZFP14Q9HCL3 533 aa24.18■■□□□ 1.46
PTP4A1-203ENST00000473334 STK25O00506 426 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 CALUO43852 315 aaPredicted RBP24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 PFKPQ01813 784 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 PLEKHO2Q8TD55 490 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 PARD3BQ8TEW8 1205 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 KBTBD7Q8WVZ9 684 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 PKMYT1Q99640 499 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 TBC1D17Q9HA65 648 aa24.17■■□□□ 1.46
PTP4A1-203ENST00000473334 GALR2O43603 387 aaPredicted RBP24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 CASP4P49662 377 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 AP3M2P53677 418 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 TCF15Q12870 199 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 TRPC3Q13507 836 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 PHLDB3Q6NSJ2 640 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 GAREM2Q75VX8 874 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 FMR1NBQ8N0W7 255 aaPredicted RBP24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 ZSCAN18Q8TBC5 510 aaPredicted RBP24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 GIPC2Q8TF65 315 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 MMS19Q96T76 1030 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 PI4K2AQ9BTU6 479 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 TRPV4Q9HBA0 871 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 ABCB6Q9NP58 842 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 GTF3C4Q9UKN8 822 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 TRAF3IP3Q9Y228 551 aa24.16■■□□□ 1.46
PTP4A1-203ENST00000473334 LRRIQ3A6PVS8 624 aaPredicted RBP24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 HCRTO43612 131 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 PI15O43692 258 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 STAU1O95793 577 aaKnown RBP24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 WARSP23381 471 aaKnown RBP24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 GABRR2P28476 465 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 SNW1Q13573 536 aaKnown RBP24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 TAF12Q16514 161 aa24.15■■□□□ 1.46
PTP4A1-203ENST00000473334 GUF1Q8N442 669 aaKnown RBP24.15■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms