RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 FAXDC2Q96IV6 333 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 MSTO1Q9BUK6 570 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 RGPD3A6NKT7 1758 aaPredicted RBP22.26■■□□□ 1.15
COL18A1-207ENST00000473212 RGPD4Q7Z3J3 1758 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 A0A1W2PPM1 405 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 KRT1P04264 644 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 HMGCS2P54868 508 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 CYP4A22Q5TCH4 519 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 ZNF449Q6P9G9 518 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 TRIM72Q6ZMU5 477 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 PHF13Q86YI8 300 aaPredicted RBP22.26■■□□□ 1.15
COL18A1-207ENST00000473212 ALLCQ8N6M5 410 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 SENP7Q9BQF6 1050 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 TMEM121Q9BTD3 319 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 TJP2Q9UDY2 1190 aa22.26■■□□□ 1.15
COL18A1-207ENST00000473212 EDF1O60869 148 aaKnown RBP22.25■■□□□ 1.15
COL18A1-207ENST00000473212 WFS1O76024 890 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 RCOR2Q8IZ40 523 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 RTKN2Q8IZC4 609 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 AGBL3Q8NEM8 1001 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 VCPIP1Q96JH7 1222 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 SMG5Q9UPR3 1016 aaKnown RBP22.25■■□□□ 1.15
COL18A1-207ENST00000473212 CNTNAP2Q9UHC6 1331 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 ATP5HO75947 161 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 IFNB1P01574 187 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 TMEM132BQ14DG7 1078 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 PARP6Q2NL67 630 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 WDR72Q3MJ13 1102 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 ANKMY2Q8IV38 441 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 REPS2Q8NFH8 660 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 PARVAQ9NVD7 372 aa22.25■■□□□ 1.15
COL18A1-207ENST00000473212 MAP3K20Q9NYL2 800 aaKnown RBP22.25■■□□□ 1.15
COL18A1-207ENST00000473212 ZNF214Q9UL59 606 aaPredicted RBP22.25■■□□□ 1.15
COL18A1-207ENST00000473212 NEBLO76041 1014 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 TJP3O95049 919 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 EFTUD2Q15029 972 aaKnown RBP eCLIP22.24■■□□□ 1.151e-7■■■■■ 29.8
COL18A1-207ENST00000473212 RGS9BPQ6ZS82 235 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 ZBTB33Q86T24 672 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 RBM41Q96IZ5 413 aaKnown RBP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 TRIM6Q9C030 488 aaPredicted RBP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 C12orf65Q9H3J6 166 aaKnown RBP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 IP6K2Q9UHH9 426 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 K7ERI5 159 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 T-ENOLP0DO92 83 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 FGFR1P11362 822 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 ALDH3A1P30838 453 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 DYNLT1P63172 113 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 NCOA4Q13772 614 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 HHATQ5VTY9 493 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 AGGF1Q8N302 714 aaeCLIP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 RDM1Q8NG50 284 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 C10orf82Q8WW14 230 aa22.24■■□□□ 1.15
COL18A1-207ENST00000473212 ZNF668Q96K58 619 aaPredicted RBP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 MAK16Q9BXY0 300 aaKnown RBP22.24■■□□□ 1.15
COL18A1-207ENST00000473212 DCTN3O75935 186 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 CBX6O95503 412 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 C1QBPQ07021 282 aaKnown RBP22.23■■□□□ 1.15
COL18A1-207ENST00000473212 ENPEPQ07075 957 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 PDIA2Q13087 525 aaKnown RBP22.23■■□□□ 1.15
COL18A1-207ENST00000473212 SMTNL2Q2TAL5 461 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 SCARA5Q6ZMJ2 495 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 NSUN6Q8TEA1 469 aaKnown RBP22.23■■□□□ 1.15
COL18A1-207ENST00000473212 PSEN1P49768 467 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 CCNG1P51959 295 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 SLC18A1P54219 525 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 NRLP54845 237 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 MORF4L2Q15014 288 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 CCDC142Q17RM4 750 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 RNASEH2BQ5TBB1 312 aaKnown RBP22.23■■□□□ 1.15
COL18A1-207ENST00000473212 LONP2Q86WA8 852 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 FAM13CQ8NE31 585 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 SLC7A6OSQ96CW6 309 aaPredicted RBP22.23■■□□□ 1.15
COL18A1-207ENST00000473212 SENP1Q9P0U3 644 aa22.23■■□□□ 1.15
COL18A1-207ENST00000473212 NFASCO94856 1347 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TMEM191CA6NGB0 347 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 ALOX15BO15296 676 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TYROBPO43914 113 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 WEE2P0C1S8 567 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TMEM191BP0C7N4 346 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 MMP8P22894 467 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 PLCB3Q01970 1234 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 EN1Q05925 392 aaPredicted RBP22.22■■□□□ 1.15
COL18A1-207ENST00000473212 DRICH1Q6PGQ1 229 aaPredicted RBP22.22■■□□□ 1.15
COL18A1-207ENST00000473212 LVRNQ6Q4G3 990 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 SPOCD1Q6ZMY3 1216 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 OTOAQ7RTW8 1153 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 DEPTORQ8TB45 409 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TBC1D10AQ9BXI6 508 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 MTMR12Q9C0I1 747 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 CYP39A1Q9NYL5 469 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 STYXL1Q9Y6J8 313 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 PARP14Q460N5 1801 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 LRRD1A4D1F6 860 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 SUPT20HL2P0C7V6 817 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 GM2AP17900 193 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 EPHB2P29323 1055 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 GDF10P55107 478 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 RTP1P59025 263 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TAF11Q15544 211 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 SUPT20HL1Q3ZLR7 823 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms