RNA–Protein interactions for RNA: ENST00000472991.5

SMC4-214, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-214ENST00000472991 CLDN10P78369 228 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 RBP5P82980 135 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 DSG1Q02413 1049 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 ENPEPQ07075 957 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 PPP3CAQ08209 521 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 CBLBQ13191 982 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 ZSCAN23Q3MJ62 389 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 ZACNQ401N2 412 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 SV2CQ496J9 727 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 ANO6Q4KMQ2 910 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 CT47A1Q5JQC4 288 aaPredicted RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 INTS6LQ5JSJ4 861 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 RTP2Q5QGT7 225 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 PDE12Q6L8Q7 609 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 KIAA1841Q6NSI8 718 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 PRSS55Q6UWB4 352 aaPredicted RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 DSTYKQ6XUX3 929 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 RIN2Q8WYP3 895 aaPredicted RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 CNOT6LQ96LI5 555 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 FUCA2Q9BTY2 467 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 NSUN3Q9H649 340 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 METTL14Q9HCE5 456 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 NGRNQ9NPE2 291 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 STK39Q9UEW8 545 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
SMC4-214ENST00000472991 PRUNE2Q8WUY3 3088 aa9.78□□□□□ -0.84
SMC4-214ENST00000472991 M0QZQ0 153 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 IKBKBO14920 756 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 CLSTN1O94985 981 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 LETM1O95202 739 aaPredicted RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 VNN1O95497 513 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 FGFR1OPO95684 399 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 CXCL14O95715 111 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 GNA14O95837 355 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 CST3P01034 146 aaPredicted RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 CCDC192P0DO97 292 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 FGFR3P22607 806 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 PNPLA4P41247 253 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 PIK3CAP42336 1068 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 MXI1P50539 228 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 MARSP56192 900 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 MCCD1P59942 119 aaPredicted RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 MYL6P60660 151 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 TRPC3Q13507 836 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 BMS1Q14692 1282 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 CCDC85BQ15834 202 aaPredicted RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 PSMD5Q16401 504 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 HSP90AA4PQ58FG1 418 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 TCEAL5Q5H9L2 206 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 KIAA0319Q5VV43 1072 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 C15orf39Q6ZRI6 1047 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 SV2AQ7L0J3 742 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 FRMD5Q7Z6J6 570 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 RBM23Q86U06 439 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 LRRC52Q8N7C0 313 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 PPM1EQ8WY54 764 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 PIK3R5Q8WYR1 880 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 SLC35C1Q96A29 364 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 SENP8Q96LD8 212 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 TTPALQ9BTX7 342 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 TMEM8AQ9HCN3 771 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 MRPL17Q9NRX2 175 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 CHST7Q9NS84 486 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 NFE2L3Q9Y4A8 694 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 TIMM13Q9Y5L4 95 aaPredicted RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 GREB1Q4ZG55 1949 aa9.77□□□□□ -0.85
SMC4-214ENST00000472991 ZNF638Q14966 1978 aaKnown RBP9.77□□□□□ -0.85
SMC4-214ENST00000472991 DENND4AQ7Z401 1863 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 DENND4CQ5VZ89 1909 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 COL6A3P12111 3177 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 KPNA7A9QM74 516 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 SYN3O14994 580 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 PER2O15055 1255 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 STX10O60499 249 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 HLA-DRAP01903 254 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 ODC1P11926 461 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 PAX3P23760 479 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 GTF2F1P35269 517 aaKnown RBP eCLIP9.76□□□□□ -0.858e-49■■■■■ 172.1
SMC4-214ENST00000472991 NRIP1P48552 1158 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 DHX9Q08211 1270 aaKnown RBP9.76□□□□□ -0.85
SMC4-214ENST00000472991 MYO1EQ12965 1108 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 NCOA4Q13772 614 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 ZNF699Q32M78 642 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 CBWD6Q4V339 395 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 CBWD3Q5JTY5 395 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 CBWD5Q5RIA9 395 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 KRT39Q6A163 491 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 IRF2BP1Q8IU81 584 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 CREBRFQ8IUR6 639 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 TRIM59Q8IWR1 403 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 AOPEPQ8N6M6 819 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 MRPL43Q8N983 215 aaKnown RBP9.76□□□□□ -0.85
SMC4-214ENST00000472991 APPL2Q8NEU8 664 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 LNX1Q8TBB1 728 aaPredicted RBP9.76□□□□□ -0.85
SMC4-214ENST00000472991 ENOX1Q8TC92 643 aaKnown RBP9.76□□□□□ -0.85
SMC4-214ENST00000472991 TAS1R2Q8TE23 839 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 PPP2R3CQ969Q6 453 aa9.76□□□□□ -0.85
SMC4-214ENST00000472991 ELMO3Q96BJ8 720 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms