RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 BTNL9Q6UXG8 535 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 HERC6Q8IVU3 1022 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 CARNMT1Q8N4J0 409 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 FIBCD1Q8N539 461 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 CDK5RAP1Q96SZ6 601 aaKnown RBP12.85□□□□□ -0.35
IRF1-208ENST00000472045 GAD1Q99259 594 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 ZBTB18Q99592 522 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 TLR8Q9NR97 1041 aaKnown RBP12.85□□□□□ -0.35
IRF1-208ENST00000472045 KPNA7A9QM74 516 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 EML1O00423 815 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 ASS1P00966 412 aaKnown RBP12.85□□□□□ -0.35
IRF1-208ENST00000472045 RCN2Q14257 317 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 GPATCH11Q8N954 259 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 ATL2Q8NHH9 583 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 TMEM176AQ96HP8 235 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 LRGUKQ96M69 825 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 FRMPD4Q14CM0 1322 aa12.85□□□□□ -0.35
IRF1-208ENST00000472045 ONECUT3O60422 494 aaPredicted RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 TMCC1O94876 653 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 TMEM253P0C7T8 217 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 BOLA3Q53S33 107 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 KRT35Q92764 455 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 FOPNLQ96NB1 174 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CELF4Q9BZC1 486 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 SLC13A4Q9UKG4 626 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 A0A1W2PQJ5 194 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 PRR23AA6NEV1 266 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CFAP99D6REC4 459 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 SMIM22K7EJ46 135 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 MTSS1O43312 755 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 PLA2G6O60733 806 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 TOMM70O94826 608 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 SUN1O94901 812 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 KPNA1P52294 538 aaPredicted RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 OCRLQ01968 901 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 IMPG1Q17R60 797 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 SMTNL2Q2TAL5 461 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 HP1BP3Q5SSJ5 553 aaPredicted RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 EMBQ6PCB8 327 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 GPR63Q9BZJ6 419 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 ATXN3LQ9H3M9 355 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CHST12Q9NRB3 414 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CISHQ9NSE2 258 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 ASTN2O75129 1339 aaPredicted RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 ZNF197O14709 1029 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CA12O43570 354 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 EIF4BP23588 611 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 COPS2P61201 443 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 NR1I3Q14994 352 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 NT5DC4Q86YG4 428 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 CHP1Q99653 195 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 MRPL17Q9NRX2 175 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 FBXL21Q9UKT6 434 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 G3BP2Q9UN86 482 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 SYNCRIPO60506 623 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 MAP4P27816 1152 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 BST2Q10589 180 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 CES5AQ6NT32 575 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 PLPPR4Q7Z2D5 763 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 TBC1D19Q8N5T2 526 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 PGLYRP2Q96PD5 576 aa12.84□□□□□ -0.35
IRF1-208ENST00000472045 NOVA2Q9UNW9 492 aaKnown RBP12.84□□□□□ -0.35
IRF1-208ENST00000472045 RECQL4O94761 1208 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 APRTP07741 180 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 KLK7P49862 253 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 PRMT2P55345 433 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 PTPN11Q06124 597 aaPredicted RBP12.83□□□□□ -0.35
IRF1-208ENST00000472045 ACAD10Q6JQN1 1059 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 SZRD1Q7Z422 152 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 ARHGEF26Q96DR7 871 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 PORCNQ9H237 461 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 FBXO44Q9H4M3 255 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 INTS13Q9NVM9 706 aa12.83□□□□□ -0.35
IRF1-208ENST00000472045 LACTBL1A8MY62 500 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 TTC4O95801 387 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 PON1P27169 355 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 NBPF20Q3BBV1 942 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 MTHFD1LQ6UB35 978 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 ANGPTL8Q6UXH0 198 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 SLC25A41Q8N5S1 370 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 SDCCAG3Q96C92 435 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 FGD4Q96M96 766 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 CIPCQ9C0C6 399 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 ZFATQ9P243 1243 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 ZMYM2Q9UBW7 1377 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 A0A087WUV0 522 aaPredicted RBP12.83□□□□□ -0.36
IRF1-208ENST00000472045 TMEM247A6NEH6 219 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 SPATA31C2B4DYI2 1134 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 MAPK13O15264 365 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 MAP3K13O43283 966 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 HSPA8P11142 646 aaKnown RBP12.83□□□□□ -0.36
IRF1-208ENST00000472045 ACAT1P24752 427 aaKnown RBP12.83□□□□□ -0.36
IRF1-208ENST00000472045 TUFMP49411 452 aaKnown RBP12.83□□□□□ -0.36
IRF1-208ENST00000472045 TKTL1P51854 596 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 CDR2Q01850 454 aa12.83□□□□□ -0.36
IRF1-208ENST00000472045 DHX34Q14147 1143 aaKnown RBP12.83□□□□□ -0.36
IRF1-208ENST00000472045 DUSP28Q4G0W2 176 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms