RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 USP39Q53GS9 565 aaKnown RBP20.64■□□□□ 0.89
SORT1-203ENST00000471996 NAIF1Q69YI7 327 aaPredicted RBP20.64■□□□□ 0.89
SORT1-203ENST00000471996 CYP2U1Q7Z449 544 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 EZH1Q92800 747 aaPredicted RBP20.64■□□□□ 0.89
SORT1-203ENST00000471996 KIF12Q96FN5 646 aa20.64■□□□□ 0.89
SORT1-203ENST00000471996 UBQLN1Q9UMX0 589 aaKnown RBP20.64■□□□□ 0.89
SORT1-203ENST00000471996 KIF26AQ9ULI4 1882 aaPredicted RBP20.64■□□□□ 0.89
SORT1-203ENST00000471996 AKAP13Q12802 2813 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 TTC26A0AVF1 554 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 GJA4P35212 333 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 PDGFRLQ15198 375 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 TAF12Q16514 161 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 CC2D1AQ6P1N0 951 aaPredicted RBP20.63■□□□□ 0.89
SORT1-203ENST00000471996 MAB21L3Q8N8X9 362 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 OR10T2Q8NGX3 314 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 RIN3Q8TB24 985 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 SLC32A1Q9H598 525 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 KIF9Q9HAQ2 790 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 C17orf75Q9HAS0 396 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 TDP1Q9NUW8 608 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 KLK13Q9UKR3 277 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 DMXL2Q8TDJ6 3036 aa20.63■□□□□ 0.89
SORT1-203ENST00000471996 DDX6P26196 483 aaKnown RBP eCLIP20.62■□□□□ 0.89
SORT1-203ENST00000471996 GUCY2FP51841 1108 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 LILRA4P59901 499 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 MCL1Q07820 350 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 SLC39A12Q504Y0 691 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 TMEM150AQ86TG1 271 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 TSTD1Q8NFU3 115 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 GIPC2Q8TF65 315 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 SENP8Q96LD8 212 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 DRC1Q96MC2 740 aa20.62■□□□□ 0.89
SORT1-203ENST00000471996 NTPCRQ9BSD7 190 aaKnown RBP20.62■□□□□ 0.89
SORT1-203ENST00000471996 DDX19AQ9NUU7 478 aaKnown RBP20.62■□□□□ 0.89
SORT1-203ENST00000471996 EVLQ9UI08 416 aaPredicted RBP20.62■□□□□ 0.89
SORT1-203ENST00000471996 SLC16A4O15374 487 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 CLDN3O15551 220 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 F11P03951 625 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 CLTAP09496 248 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ODC1P11926 461 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 FOSBP53539 338 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 STRN3Q13033 797 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 MAPK7Q13164 816 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ORC2Q13416 577 aaPredicted RBP20.61■□□□□ 0.89
SORT1-203ENST00000471996 TRIM29Q14134 588 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ZNF174Q15697 407 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ZPBP2Q6X784 338 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 CD101Q93033 1021 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 TPSD1Q9BZJ3 242 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ZCWPW1Q9H0M4 648 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 ECT2Q9H8V3 914 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 CITO14578 2027 aa20.61■□□□□ 0.89
SORT1-203ENST00000471996 PPEF2O14830 753 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 XPOTO43592 962 aaKnown RBP20.6■□□□□ 0.89
SORT1-203ENST00000471996 BCKDHBP21953 392 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 NMT1P30419 496 aaKnown RBP20.6■□□□□ 0.89
SORT1-203ENST00000471996 NLRP12P59046 1061 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 LMAN2Q12907 356 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 PSMD2Q13200 908 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 RASSF3Q86WH2 238 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 CPA6Q8N4T0 437 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 NECAB1Q8N987 351 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 PIGKQ92643 395 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 RUSC1Q9BVN2 902 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 HAPLN2Q9GZV7 340 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 LAMA5O15230 3695 aa20.6■□□□□ 0.89
SORT1-203ENST00000471996 DSPP15924 2871 aaKnown RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 ATG2BQ96BY7 2078 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 SFI1A8K8P3 1242 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 LACTBL1A8MY62 500 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 PAX3P23760 479 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 DHPSP49366 369 aaPredicted RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 FXR2P51116 673 aaKnown RBP eCLIP20.59■□□□□ 0.892e-6■□□□□ 8.3
SORT1-203ENST00000471996 CDR1P51861 262 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 PPP2R3AQ06190 1150 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 ZNF268Q14587 947 aaPredicted RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 TRIM61Q5EBN2 209 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 TXNDC8Q6A555 127 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 TMEM161BQ8NDZ6 487 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 NSUN7Q8NE18 718 aaKnown RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 CCDC26Q8TAB7 109 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 C2orf15Q8WU43 125 aaKnown RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 CNOT6LQ96LI5 555 aaKnown RBP20.59■□□□□ 0.89
SORT1-203ENST00000471996 LRWD1Q9UFC0 647 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 DNM3Q9UQ16 869 aa20.59■□□□□ 0.89
SORT1-203ENST00000471996 E9PMD0 336 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 CYP11A1P05108 521 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 HAPLN1P10915 354 aaPredicted RBP20.58■□□□□ 0.89
SORT1-203ENST00000471996 HMGA1P17096 107 aaKnown RBP20.58■□□□□ 0.89
SORT1-203ENST00000471996 TNFSF9P41273 254 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 SPATA1Q5VX52 437 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 ANO7Q6IWH7 933 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 RINT1Q6NUQ1 792 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 C1orf186Q6ZWK4 172 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 MON1AQ86VX9 555 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 PROSER1Q86XN7 944 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 OSCP1Q8WVF1 389 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 SPIRE2Q8WWL2 714 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 TSPAN18Q96SJ8 248 aa20.58■□□□□ 0.89
SORT1-203ENST00000471996 NUSAP1Q9BXS6 441 aaKnown RBP20.58■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms