RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 KIFC1Q9BW19 673 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 STOML1Q9UBI4 398 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CLASP2O75122 1294 aaKnown RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 POLD3Q15054 466 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PI4K2AQ9BTU6 479 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EHD2Q9NZN4 543 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PEG3Q9GZU2 1588 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ERBB4Q15303 1308 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PLOD1Q02809 727 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LAMC2Q13753 1193 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MAPRE2Q15555 327 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RNF180Q86T96 592 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PROM2Q8N271 834 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ECSITQ9BQ95 431 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CINPQ9BW66 212 aaPredicted RBP13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TMEM117Q9H0C3 514 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 KCTD10Q9H3F6 313 aa13.8□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RHOBTB1O94844 696 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NME5P56597 212 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GLT1D1Q96MS3 346 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WWOXQ9NZC7 414 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NDOR1Q9UHB4 597 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NUDT14O95848 222 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 THUMPD3Q9BV44 507 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GGA3Q9NZ52 723 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TMCC3Q9ULS5 477 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PCNAP12004 261 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SGF29Q96ES7 293 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HACL1Q9UJ83 578 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ANAPC2Q9UJX6 822 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DBR1Q9UK59 544 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DIS3Q9Y2L1 958 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SNX8Q9Y5X2 465 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MRPS35P82673 323 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SNX17Q15036 470 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TDRD10Q5VZ19 366 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TRIM72Q6ZMU5 477 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CARNMT1Q8N4J0 409 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ADI1Q9BV57 179 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FAM96AQ9H5X1 160 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SH3GLB2Q9NR46 395 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TPST1O60507 370 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 SP100P23497 879 aaPredicted RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PSMA4P25789 261 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 POU1F1P28069 291 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CAMK2GQ13555 558 aaPredicted RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TBC1D10CQ8IV04 446 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DENND6AQ8IWF6 608 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MRPL42Q9Y6G3 142 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CD2BP2O95400 341 aaKnown RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AP1S2P56377 157 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PPP2R2AP63151 447 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 EMBQ6PCB8 327 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCDC149Q6ZUS6 474 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 BBS7Q8IWZ6 715 aa13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ACSF2Q96CM8 615 aaPredicted RBP13.79□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 GMNCA6NCL1 334 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RNASEH1O60930 286 aaKnown RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NFICP08651 508 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CYP2C9P11712 490 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 WDR60Q8WVS4 1066 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 PADI4Q9UM07 663 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ATP5HO75947 161 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NPTXRO95502 500 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TNNI3P19429 210 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LIFRP42702 1097 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ORC1Q13415 861 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TCEAL5Q5H9L2 206 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 INSRP06213 1382 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MROH7-TTC4A0A0A0MT08 1334 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CCDC22O60826 627 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ALDH9A1P49189 494 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HIST2H2ACQ16777 129 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 HIST2H2AA3Q6FI13 130 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 C4orf33Q8N1A6 199 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CATSPERBQ9H7T0 1116 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CHORDC1Q9UHD1 332 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 C16orf96A6NNT2 1141 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 LGALS16A8MUM7 142 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RPS6KA4O75676 772 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NR1H3Q13133 447 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 FOXR1Q6PIV2 292 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TRIM65Q6PJ69 517 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 B3GALNT2Q8NCR0 500 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 TSPAN17Q96FV3 270 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 NSMCE4AQ9NXX6 385 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 RCOR1Q9UKL0 485 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 KCNQ2O43526 872 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CDH2P19022 906 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MTFR1Q15390 333 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 C3orf62Q6ZUJ4 267 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 P3H2Q8IVL5 708 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MOSPD2Q8NHP6 518 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 MED8Q96G25 268 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 DCP1AQ9NPI6 582 aaPredicted RBP13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 CHMP2BQ9UQN3 213 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 ATP10AO60312 1499 aa13.78□□□□□ -0.2
NPHP3-ACAD11-201ENST00000471702 AHCYL2Q96HN2 611 aaKnown RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms