RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 RFC1P35251 1148 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 STAT1P42224 750 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SLC5A3P53794 718 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ACTR3P61158 418 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 NR1H3Q13133 447 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PPP2R5BQ15173 497 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 UBE3CQ15386 1083 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 OASLQ15646 514 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 NPY5RQ15761 445 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CLUL1Q15846 466 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CLPPQ16740 277 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 ZNF280DQ6N043 979 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CYFIP1Q7L576 1253 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 HEATR3Q7Z4Q2 680 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SLFN11Q7Z7L1 901 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 ENAHQ8N8S7 591 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 SPATA5Q8NB90 893 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 SDR42E1Q8WUS8 393 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TNFRSF25Q93038 417 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TTC17Q96AE7 1141 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PTCD3Q96EY7 689 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 NSMCE3Q96MG7 304 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 CEP63Q96MT8 703 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 NUDT12Q9BQG2 462 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TSSK1BQ9BXA7 367 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 NMUR2Q9GZQ4 415 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 BHMT2Q9H2M3 363 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 MAGEF1Q9HAY2 307 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 PALMDQ9NP74 551 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TYW1Q9NV66 732 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 UVRAGQ9P2Y5 699 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 RSL24D1Q9UHA3 163 aaKnown RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 FBXO9Q9UK97 447 aaPredicted RBP4.44□□□□□ -1.7
VPS50-210ENST00000471188 GRID1Q9ULK0 1009 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 TBC1D30Q9Y2I9 924 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 DTNAQ9Y4J8 743 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 N6AMT1Q9Y5N5 214 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 USP31Q70CQ4 1352 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 FAM205AQ6ZU69 1335 aa4.44□□□□□ -1.7
VPS50-210ENST00000471188 DISP2A7MBM2 1401 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 OR52Z1P0C646 297 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 KITP10721 976 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 HSPA8P11142 646 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 CYP2C9P11712 490 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 KRT4P19013 534 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 BCAP31P51572 246 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ALDH18A1P54886 795 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 YWHAGP61981 247 aaKnown RBP eCLIP4.43□□□□□ -1.7
VPS50-210ENST00000471188 IRX4P78413 519 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MRPS9P82933 396 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 CDK16Q00536 496 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 STAT4Q14765 748 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TGFBIQ15582 683 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MAPK6Q16659 721 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 OGFOD2Q6N063 350 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 FBXL19Q6PCT2 694 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZNF790Q6PG37 636 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 LDHAL6AQ6ZMR3 332 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RNF207Q6ZRF8 634 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 AMIGO2Q86SJ2 522 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ALYREFQ86V81 257 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 SRBD1Q8N5C6 995 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 CABLES1Q8TDN4 633 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 FAM172AQ8WUF8 416 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 STARD8Q92502 1023 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 LARP4BQ92615 738 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 TTC25Q96NG3 672 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CSRNP1Q96S65 589 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZSCAN10Q96SZ4 725 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 SH3GL1Q99961 368 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 THAP2Q9H0W7 228 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 EPB41L1Q9H4G0 881 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PARVBQ9HBI1 364 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 S100A14Q9HCY8 104 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RIC8AQ9NPQ8 531 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TRPV5Q9NQA5 729 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 PCYOX1Q9UHG3 505 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 HDAC9Q9UKV0 1011 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TTC7AQ9ULT0 858 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 SMG5Q9UPR3 1016 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 GIT1Q9Y2X7 761 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 MTO1Q9Y2Z2 717 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZMYM2Q9UBW7 1377 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ABCB11O95342 1321 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 IGSF9BQ9UPX0 1349 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 A0A1W2PPM1 405 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 GSG1L2A8MUP6 293 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SMIM22K7EJ46 135 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 K7EPI3 171 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CNOT3O75175 753 aaKnown RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 PIAS1O75925 651 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TM7SF2O76062 418 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 TNFAIP8O95379 198 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 ZBTB11O95625 1053 aaPredicted RBP4.43□□□□□ -1.7
VPS50-210ENST00000471188 KRT75O95678 551 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 APOEP02649 317 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 SMIM18P0DKX4 95 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 RAG1P15918 1043 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 CHRNB2P17787 502 aa4.43□□□□□ -1.7
VPS50-210ENST00000471188 NR2F2P24468 414 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms