RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 ERBB2P04626 1255 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 PDHA1P08559 390 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 GNAI3P08754 354 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 GNAI1P63096 354 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 NHLH1Q02575 133 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 TUBB3Q13509 450 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 ERCC6LQ2NKX8 1250 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 AOPEPQ8N6M6 819 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 PPP1R35Q8TAP8 253 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 UBE2Q2Q8WVN8 375 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 JPH3Q8WXH2 748 aaPredicted RBP6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 MRGPRX1Q96LB2 322 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 OSBPL9Q96SU4 736 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 TIMP4Q99727 224 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 CNPPD1Q9BV87 410 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 RSAD1Q9HA92 442 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 KIAA1586Q9HCI6 787 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 GABBR1Q9UBS5 961 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 ENTPD2Q9Y5L3 495 aa6.39□□□□□ -1.39
PRPF40A-206ENST00000471167 H3BUI4 141 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 M0QYG6 137 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 MASP2O00187 686 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 AP1G1O43747 822 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 DTNBO60941 627 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 PIM1P11309 404 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 RBM20Q5T481 1227 aaKnown RBP6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 EPM2AIP1Q7L775 607 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 FAM46DQ8NEK8 389 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 C1GALT1C1Q96EU7 318 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 NT5C1BQ96P26 610 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 CDH19Q9H159 772 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 ARMT1Q9H993 441 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 KLC4Q9NSK0 619 aa6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 FEZ2Q9UHY8 353 aaPredicted RBP6.38□□□□□ -1.39
PRPF40A-206ENST00000471167 WIPF3A6NGB9 483 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 PRPF3O43395 683 aaKnown RBP6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 RBMXL2O75526 392 aaKnown RBP6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 JUPP14923 745 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 GCLCP48506 637 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 NBPF8Q3BBV2 869 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 PREPLQ4J6C6 727 aaPredicted RBP6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 KLHDC4Q8TBB5 520 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 SLC35G2Q8TBE7 412 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 FAM167AQ96KS9 214 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 TAAR9Q96RI9 348 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 MAP3K14Q99558 947 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 KMT5AQ9NQR1 393 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 SLC17A6Q9P2U8 582 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 ST3GAL5Q9UNP4 418 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 SSX2IPQ9Y2D8 614 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 TNFRSF18Q9Y5U5 241 aa6.37□□□□□ -1.39
PRPF40A-206ENST00000471167 A0A088AWK7 358 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 PPM1GO15355 546 aaPredicted RBP6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ELLP55199 621 aaPredicted RBP6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 SOX8P57073 446 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 NXPH1P58417 271 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ANAPC15P60006 121 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 IGBP1P78318 339 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 LRRC41Q15345 812 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 IFIT1BQ5T764 474 aaKnown RBP6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 FAM160B1Q5W0V3 765 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 B3GALNT2Q8NCR0 500 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ZNF384Q8TF68 577 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 UROC1Q96N76 676 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 SLC46A1Q96NT5 459 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ACO2Q99798 780 aaKnown RBP6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ACTRT3Q9BYD9 372 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 HESX1Q9UBX0 185 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 STAP2Q9UGK3 403 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 ZNF180Q9UJW8 692 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 PNMA8BQ9ULN7 279 aaPredicted RBP6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 STXBP5LQ9Y2K9 1186 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 RAD54BQ9Y620 910 aa6.36□□□□□ -1.39
PRPF40A-206ENST00000471167 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 OFD1O75665 1012 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 MYBP10242 640 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 NCLP19338 710 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 WT1P19544 449 aaPredicted RBP6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 ITIH3Q06033 890 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 SYCE2Q6PIF2 218 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 PCSK9Q8NBP7 692 aaKnown RBP6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 CDK5RAP3Q96JB5 506 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 AIFM3Q96NN9 605 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 HEPHQ9BQS7 1158 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 FRMD4BQ9Y2L6 1034 aa6.35□□□□□ -1.39
PRPF40A-206ENST00000471167 FNDC1Q4ZHG4 1894 aaPredicted RBP6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 AOX1Q06278 1338 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 CGB1A6NKQ9 187 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 PPM1DO15297 605 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 RFPL1O75677 317 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 UBXN7O94888 489 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 UNC5CO95185 931 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 VCAM1P19320 739 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 ARFIP2P53365 341 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 RAB1AP62820 205 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 TMEM108Q6UXF1 575 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 LRGUKQ96M69 825 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 TPSD1Q9BZJ3 242 aa6.34□□□□□ -1.39
PRPF40A-206ENST00000471167 ATP6V0A4Q9HBG4 840 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms