RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 INSL6Q9Y581 213 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 PCDHB12Q9Y5F1 795 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 TANC1Q9C0D5 1861 aa10.38□□□□□ -0.75
CCM2-204ENST00000470837 ATP8B3O60423 1300 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 H7C4K7 107 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 M0QYV0 167 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 M0QZQ0 153 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 CITO14578 2027 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 KIF5CO60282 957 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 RTN2O75298 545 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 FTLP02792 175 aaPredicted RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 CYP11A1P05108 521 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 GALTP07902 379 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 GZMAP12544 262 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ATP2A2P16615 1042 aaKnown RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 PPM1AP35813 382 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 BRCC3P46736 316 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 SLC11A1P49279 550 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 BCAR1P56945 870 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 FMO1Q01740 532 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ORC1Q13415 861 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 CNGA2Q16280 664 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 CLEC16AQ2KHT3 1053 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 RALGAPA2Q2PPJ7 1873 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ASTE1Q2TB18 679 aaPredicted RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 DNTTIP2Q5QJE6 756 aaKnown RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 LIN9Q5TKA1 542 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 KIAA1841Q6NSI8 718 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 CEP57Q86XR8 500 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 FIBCD1Q8N539 461 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 B3GALNT2Q8NCR0 500 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 C3orf58Q8NDZ4 430 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 KBTBD7Q8WVZ9 684 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 TMEM169Q96HH4 297 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 PPP1R13BQ96KQ4 1090 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ALS2CR12Q96Q35 445 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 SYT15Q9BQS2 421 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.37□□□□□ -0.75
CCM2-204ENST00000470837 OXCT2Q9BYC2 517 aaPredicted RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 ELOVL4Q9GZR5 314 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ACP6Q9NPH0 428 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 KCND1Q9NSA2 647 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 CDH9Q9ULB4 789 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 INTUQ9ULD6 942 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 TIMM13Q9Y5L4 95 aaPredicted RBP10.37□□□□□ -0.75
CCM2-204ENST00000470837 BRCA2P51587 3418 aa10.37□□□□□ -0.75
CCM2-204ENST00000470837 ANKRD62A6NC57 917 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 I3L4J1 428 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 KIF2AO00139 706 aaPredicted RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 GABRDO14764 452 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 TLL1O43897 1013 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 GJB5O95377 273 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 TUBB4AP04350 444 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 MYBL1P10243 752 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 PTPN1P18031 435 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 NOP2P46087 812 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 KRT17Q04695 432 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 PTPN14Q15678 1187 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 GOLGA7BQ2TAP0 167 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 FAM171A1Q5VUB5 890 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 NAA35Q5VZE5 725 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 ACAD10Q6JQN1 1059 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 ZNF280DQ6N043 979 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 FUT10Q6P4F1 479 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 KCNT2Q6UVM3 1135 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 C16orf59Q7L2K0 433 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 LIMS2Q7Z4I7 341 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 PASD1Q8IV76 773 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 DCP1BQ8IZD4 617 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 CRYBG2Q8N1P7 616 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 SLC30A5Q8TAD4 765 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 LNX1Q8TBB1 728 aaPredicted RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 IPO4Q8TEX9 1081 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 WHAMMQ8TF30 809 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 DDX1Q92499 740 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 ZNF689Q96CS4 500 aaPredicted RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 VWCEQ96DN2 955 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 CYFIP2Q96F07 1278 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 TWNKQ96RR1 684 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 RAD9AQ99638 391 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 ACBD6Q9BR61 282 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 FAM49BQ9NUQ9 324 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 SPG21Q9NZD8 308 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.36□□□□□ -0.75
CCM2-204ENST00000470837 HMGXB4Q9UGU5 601 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 GUCA1BQ9UMX6 200 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 PCDHGC3Q9UN70 934 aa10.36□□□□□ -0.75
CCM2-204ENST00000470837 NT5C1B-RDH14C9J2C7 533 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 O00370 1275 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 CAPN15O75808 1086 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 MICAL2O94851 1124 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ITGB1P05556 798 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 CALB1P05937 261 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 TMEM253P0C7T8 217 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 CHRNB2P17787 502 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ABCB4P21439 1286 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ACAT1P24752 427 aaKnown RBP10.35□□□□□ -0.75
CCM2-204ENST00000470837 LMO2P25791 158 aa10.35□□□□□ -0.75
CCM2-204ENST00000470837 ADORA2BP29275 332 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms