RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 GNAI2P04899 355 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 PDHA1P08559 390 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 EBLN1P0CF75 366 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 TYRP14679 529 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 CD6P30203 668 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 ABCG1P45844 678 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 BOP1Q14137 746 aaKnown RBP6.83□□□□□ -1.32
COL11A1-208ENST00000470170 PGS1Q32NB8 556 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 FAM153CQ494X1 144 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 ZBTB46Q86UZ6 589 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 DPF1Q92782 380 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 FAM136AQ96C01 138 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 HSPBAP1Q96EW2 488 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 ALG8Q9BVK2 526 aa6.83□□□□□ -1.32
COL11A1-208ENST00000470170 GTPBP4Q9BZE4 634 aaKnown RBP6.83□□□□□ -1.32
COL11A1-208ENST00000470170 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.83□□□□□ -1.32
COL11A1-208ENST00000470170 GCOM1H8Y6P7 765 aaPredicted RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 INO80B-WBP1J3KQ70 363 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 SOAT2O75908 522 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 ZFXP17010 805 aaPredicted RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 GCLCP48506 637 aaPredicted RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 SOX10P56693 466 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 SRSF4Q08170 494 aaKnown RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 EIF2B5Q13144 721 aaKnown RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 TBCCQ15814 346 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 FAM46DQ8NEK8 389 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 DDB2Q92466 427 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 INO80BQ9C086 356 aaPredicted RBP6.82□□□□□ -1.32
COL11A1-208ENST00000470170 SERHLQ9NQF3 203 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 EHD3Q9NZN3 535 aa6.82□□□□□ -1.32
COL11A1-208ENST00000470170 AOX1Q06278 1338 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 DRD4P21917 467 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 PCSK6P29122 969 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 EXOSC9Q06265 439 aaKnown RBP6.81□□□□□ -1.32
COL11A1-208ENST00000470170 FCRLBQ6BAA4 426 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 PTF1AQ7RTS3 328 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 FAM109AQ8N4B1 249 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 KLHDC4Q8TBB5 520 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 ZCRB1Q8TBF4 217 aaKnown RBP6.81□□□□□ -1.32
COL11A1-208ENST00000470170 HASPINQ8TF76 798 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 CHMP4CQ96CF2 233 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 KMT5AQ9NQR1 393 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 PNPOQ9NVS9 261 aa6.81□□□□□ -1.32
COL11A1-208ENST00000470170 DNAJC9-AS1A6NH13 148 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 PPM1DO15297 605 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 CCT8P50990 548 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 PLS1Q14651 629 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 CCDC157Q569K6 752 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 LRCH2Q5VUJ6 765 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 TMEM108Q6UXF1 575 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 PCSK9Q8NBP7 692 aaKnown RBP6.8□□□□□ -1.32
COL11A1-208ENST00000470170 DDX17Q92841 729 aaKnown RBP6.8□□□□□ -1.32
COL11A1-208ENST00000470170 PADI4Q9UM07 663 aa6.8□□□□□ -1.32
COL11A1-208ENST00000470170 H3BUI4 141 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 PIM1P11309 404 aaPredicted RBP6.79□□□□□ -1.32
COL11A1-208ENST00000470170 ZNF134P52741 427 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 BMPR2Q13873 1038 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 FAM160B1Q5W0V3 765 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 MVB12AQ96EY5 273 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 SLC35A4Q96G79 324 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 GPATCH3Q96I76 525 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 FAM167AQ96KS9 214 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 SLC46A1Q96NT5 459 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 TTYH3Q9C0H2 523 aa6.79□□□□□ -1.32
COL11A1-208ENST00000470170 COL3A1P02461 1466 aaPredicted RBP6.79□□□□□ -1.32
COL11A1-208ENST00000470170 DCLK1O15075 740 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 PRKCGP05129 697 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 HNRNPCP07910 306 aaKnown RBP eCLIP6.78□□□□□ -1.32
COL11A1-208ENST00000470170 JUPP14923 745 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 HDCP19113 662 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 NKX6-1P78426 367 aaPredicted RBP6.78□□□□□ -1.32
COL11A1-208ENST00000470170 PTPROQ16827 1216 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 TMEM119Q4V9L6 283 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 PLAC9Q5JTB6 97 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.78□□□□□ -1.32
COL11A1-208ENST00000470170 CELF5Q8N6W0 485 aaKnown RBP6.78□□□□□ -1.32
COL11A1-208ENST00000470170 BRIX1Q8TDN6 353 aaKnown RBP6.78□□□□□ -1.32
COL11A1-208ENST00000470170 ANKS1AQ92625 1134 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 SERTAD4Q9NUC0 356 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 RNF7Q9UBF6 113 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 HESX1Q9UBX0 185 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 SERGEFQ9UGK8 458 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 IP6K2Q9UHH9 426 aa6.78□□□□□ -1.32
COL11A1-208ENST00000470170 DNAJB5O75953 348 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 NEK2P51955 445 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 TFF2Q03403 129 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 ZNF551Q7Z340 670 aaPredicted RBP6.77□□□□□ -1.33
COL11A1-208ENST00000470170 ATRIPQ8WXE1 791 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 ARHGEF3Q9NR81 526 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 AASDHPPTQ9NRN7 309 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 PCDHA6Q9UN73 950 aa6.77□□□□□ -1.33
COL11A1-208ENST00000470170 NXPH3O95157 252 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 ALDH2P05091 517 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 PF4V1P10720 104 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 AKAP5P24588 427 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 CLCN2P51788 898 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 SOX8P57073 446 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 PAPD7Q5XG87 772 aaKnown RBP6.76□□□□□ -1.33
COL11A1-208ENST00000470170 MAVSQ7Z434 540 aa6.76□□□□□ -1.33
COL11A1-208ENST00000470170 HOOK2Q96ED9 719 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms