RNA–Protein interactions for RNA: ENST00000470086.5

LSM2-210, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 713 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-210ENST00000470086 GLT8D2Q9H1C3 349 aa9□□□□□ -0.97
LSM2-210ENST00000470086 TOR4AQ9NXH8 423 aa9□□□□□ -0.97
LSM2-210ENST00000470086 LRRIQ4A6NIV6 560 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 EIF4E1BA6NMX2 242 aaKnown RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 UPK3BL1B0FP48 263 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 UPK3BL2E5RIL1 263 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 USO1O60763 962 aaKnown RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 TADA3O75528 432 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 KRT10P13645 584 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 CPB1P15086 417 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 GABRR2P28476 465 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 ELF1P32519 619 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 MCM2P49736 904 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 GALK1P51570 392 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 SEC13P55735 322 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 RUNX3Q13761 415 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 INF2Q27J81 1249 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 GAB4Q2WGN9 574 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 CTXN3Q4LDR2 81 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 EARS2Q5JPH6 523 aaKnown RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 NCAPH2Q6IBW4 605 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 C1orf228Q6PIY5 440 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 HACE1Q8IYU2 909 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 TMTC2Q8N394 836 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 MINDY1Q8N5J2 469 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 DEFB119Q8N690 84 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 ZNF512Q96ME7 567 aaPredicted RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 SLC32A1Q9H598 525 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 CAPN10Q9HC96 672 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 POLD4Q9HCU8 107 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 GKN1Q9NS71 199 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 TUBGCP4Q9UGJ1 667 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 AFF4Q9UHB7 1163 aaKnown RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 TBX20Q9UMR3 447 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 SLC27A5Q9Y2P5 690 aa8.99□□□□□ -0.97
LSM2-210ENST00000470086 TIMM13Q9Y5L4 95 aaPredicted RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 COL27A1Q8IZC6 1860 aaPredicted RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 NYNRINQ9P2P1 1898 aaKnown RBP8.99□□□□□ -0.97
LSM2-210ENST00000470086 SMIM28A0A1B0GU29 152 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 MTMR11A4FU01 709 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 FAM149AA5PLN7 773 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 ATXN7O15265 892 aaPredicted RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 P4HBP07237 508 aaKnown RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 LIG1P18858 919 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 GJA4P35212 333 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 P2RY2P41231 377 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 USP11P51784 963 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 CLDN6P56747 220 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 GRSF1Q12849 480 aaKnown RBP eCLIP8.98□□□□□ -0.97
LSM2-210ENST00000470086 DUSP4Q13115 394 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 NT5DC1Q5TFE4 455 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 IQCEQ6IPM2 695 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 SLC23A3Q6PIS1 610 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 PIGOQ8TEQ8 1089 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 USP13Q92995 863 aaPredicted RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 UBL7Q96S82 380 aaPredicted RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 SLC46A2Q9BY10 475 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 SEMA4CQ9C0C4 833 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 ATXN3LQ9H3M9 355 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 NCOA5Q9HCD5 579 aaKnown RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 DDX25Q9UHL0 483 aaKnown RBP8.98□□□□□ -0.97
LSM2-210ENST00000470086 PILRBQ9UKJ0 227 aa8.98□□□□□ -0.97
LSM2-210ENST00000470086 DOPEY2Q9Y3R5 2298 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 A0A087WV48 116 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 H0Y626 953 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 K7EQS6 105 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 PPEF2O14830 753 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 ASAP2O43150 1006 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 PRPF3O43395 683 aaKnown RBP8.97□□□□□ -0.97
LSM2-210ENST00000470086 TLX3O43711 291 aaPredicted RBP8.97□□□□□ -0.97
LSM2-210ENST00000470086 CBFA2T3O75081 653 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 SLITRK3O94933 977 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 TRIM16O95361 564 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 LARGE1O95461 756 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 CFIP05156 583 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 RARRES1P49788 294 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 OSTNP61366 133 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 POU5F1BQ06416 359 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 CYP4F3Q08477 520 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 PLD1Q13393 1074 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 TFDP1Q14186 410 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 MXD4Q14582 209 aaPredicted RBP8.97□□□□□ -0.97
LSM2-210ENST00000470086 PCBP1Q15365 356 aaKnown RBP eCLIP8.97□□□□□ -0.971e-6■■■■□ 20.2
LSM2-210ENST00000470086 FAM187BQ17R55 369 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 ZNF423Q2M1K9 1284 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 MAP7D1Q3KQU3 841 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 TPGS2Q68CL5 300 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 ZNF280DQ6N043 979 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 SLC41A1Q8IVJ1 513 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 ELMOD1Q8N336 334 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 CCDC33Q8N5R6 958 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 ATAD1Q8NBU5 361 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 TSTD1Q8NFU3 115 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 E2F7Q96AV8 911 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 SUSD3Q96L08 255 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 CNOT6LQ96LI5 555 aaKnown RBP8.97□□□□□ -0.97
LSM2-210ENST00000470086 CDT1Q9H211 546 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 PRORYQ9H606 182 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 GJB4Q9NTQ9 266 aa8.97□□□□□ -0.97
LSM2-210ENST00000470086 OBP2AQ9NY56 170 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms