RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 NLRP4Q96MN2 994 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 PPP1R10Q96QC0 940 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 RBM15Q96T37 977 aaKnown RBP eCLIP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 POP1Q99575 1024 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 DCLK3Q9C098 648 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 NMUR2Q9GZQ4 415 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 CCDC68Q9H2F9 335 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 SELENONQ9NZV5 590 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 ADAMTS6Q9UKP5 1117 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 MAST2Q6P0Q8 1798 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 A0A088AWK7 358 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 PIK3CDO00329 1044 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 EML1O00423 815 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 ITM2AO43736 263 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 CLASP2O75122 1294 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 FAM58BPP0C7Q3 252 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 DHRS4L1P0CG22 281 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 MYL2P10916 166 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 ZNF23P17027 643 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 HMOX2P30519 316 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 CCR3P51677 355 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 NAPAP54920 295 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 CABP4P57796 275 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 KCNC4Q03721 635 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 NCOA4Q13772 614 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 MESDQ14696 234 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 TLR1Q15399 786 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 TGFBIQ15582 683 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 KNOP1Q1ED39 458 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 HERC4Q5GLZ8 1057 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 EFHC2Q5JST6 749 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 KCNK18Q7Z418 384 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 LZTR1Q8N653 840 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 TBCKQ8TEA7 893 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 PSPC1Q8WXF1 523 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 STARD8Q92502 1023 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 AGPAT1Q99943 283 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 RIOK1Q9BRS2 568 aaKnown RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 DRC3Q9H069 523 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 GREM2Q9H772 168 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 PARVBQ9HBI1 364 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 IGSF9Q9P2J2 1179 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 DNAJC12Q9UKB3 198 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 SYNPO2Q9UMS6 1093 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 EXOC7Q9UPT5 735 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 TRIM17Q9Y577 477 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 MAD1L1Q9Y6D9 718 aa9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 ZNF142P52746 1687 aaPredicted RBP9.47□□□□□ -0.89
SMARCE1-207ENST00000469334 IQCA1LA6NCM1 817 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 POC1B-GALNT4F8VUJ3 575 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 hCG_1984214I3L0E3 225 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 ADCY6O43306 1168 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 DNAJA2O60884 412 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 ADAM23O75077 832 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 LRRN2O75325 713 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 ESRRBO95718 433 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 OCM2P0CE71 109 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 OCMP0CE72 109 aaPredicted RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 PTPN2P17706 415 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 RRM1P23921 792 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 CCT8P50990 548 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 NOP14P78316 857 aaKnown RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 BTKQ06187 659 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 BMT2Q1RMZ1 405 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 GRAMD1BQ3KR37 738 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 CYP4F22Q6NT55 531 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 TTC7BQ86TV6 843 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 IQCF2Q8IXL9 164 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 ZNF713Q8N859 430 aaPredicted RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 C1orf54Q8WWF1 131 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 SREK1Q8WXA9 508 aaKnown RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 DCUN1D1Q96GG9 259 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 CCDC85AQ96PX6 553 aaPredicted RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 HGH1Q9BTY7 390 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 MAK16Q9BXY0 300 aaKnown RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 FGFBP2Q9BYJ0 223 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 FHDC1Q9C0D6 1143 aaPredicted RBP9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 LRRC4BQ9NT99 713 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 MAD2L2Q9UI95 211 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 RABGAP1Q9Y3P9 1069 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 MEGF6O75095 1541 aa9.46□□□□□ -0.89
SMARCE1-207ENST00000469334 SCN7AQ01118 1682 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 SF3B1O75533 1304 aaKnown RBP eCLIP9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 CNOT3O75175 753 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 GCP02774 474 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 KRT4P19013 534 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 NFKBIAP25963 317 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 CPA2P48052 419 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 ALDH3B2P48448 385 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 RPS3AP61247 264 aaKnown RBP9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 MYBPC2Q14324 1141 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 C16orf72Q14CZ0 275 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 CNGA3Q16281 694 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 NFIL3Q16649 462 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 CCDC142Q17RM4 750 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 IL23RQ5VWK5 629 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 GJB7Q6PEY0 223 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 RNF111Q6ZNA4 994 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 DCDC5Q6ZRR9 648 aa9.46□□□□□ -0.9
SMARCE1-207ENST00000469334 PRUNE1Q86TP1 453 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms