RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SPTLC1O15269 473 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 MFAP3LO75121 409 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 TACC1O75410 805 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 SOD2P04179 222 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 GYPCP04921 128 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ITGB1P05556 798 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 RB1P06400 928 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CD19P15391 556 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 FERP16591 822 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 WARSP23381 471 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 TKTP29401 623 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CASP14P31944 242 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 KRT9P35527 623 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 SOX5P35711 763 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 BMPR1AP36894 532 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 GNL1P36915 607 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 PBX1P40424 430 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 AARSP49588 968 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 BPIFB4P59827 614 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ERVK-21P61565 698 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ZBED6P86452 979 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 APBA1Q02410 837 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ARID5AQ03989 594 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 PTK2Q05397 1052 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ADGRE1Q14246 886 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CTXN3Q4LDR2 81 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ZNF394Q53GI3 561 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ANKS3Q6ZW76 656 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 DDX53Q86TM3 631 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 VPS52Q8N1B4 723 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 KLHL23Q8NBE8 558 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CXorf38Q8TB03 319 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 MICAL1Q8TDZ2 1067 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 GDPD5Q8WTR4 605 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 RIN2Q8WYP3 895 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 KAT5Q92993 513 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 NT5C1AQ9BXI3 368 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 OXCT2Q9BYC2 517 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 DEF6Q9H4E7 631 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CERS4Q9HA82 394 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 SIX2Q9NPC8 291 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 MRPL17Q9NRX2 175 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 SEPT11Q9NVA2 429 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 DDX43Q9NXZ2 648 aaKnown RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 BARX2Q9UMQ3 279 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CAPN11Q9UMQ6 739 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 CEP83Q9Y592 693 aa8.66□□□□□ -1.02
HDAC6-216ENST00000468949 TIMM13Q9Y5L4 95 aaPredicted RBP8.66□□□□□ -1.02
HDAC6-216ENST00000468949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 EPOPA6NHQ4 379 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 OR6C75A6NL08 312 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 EPHB6O15197 1021 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 MED7O43513 233 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 CILPO75339 1184 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 GFPT2O94808 682 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 NOL4O94818 638 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 CYP11A1P05108 521 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 PDGFRBP09619 1106 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 FAM163BP0C2L3 166 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 CPB1P15086 417 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 GNA15P30679 374 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 NDST1P52848 882 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 CDH8P55286 799 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 ARPP19P56211 112 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SLC8A3P57103 927 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 PLCB3Q01970 1234 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 UBE3AQ05086 875 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 KLHL30Q0D2K2 578 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 INCA1Q0VD86 236 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 MAPRE1Q15691 268 aaKnown RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 PSMD5Q16401 504 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SOWAHAQ2M3V2 549 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SGO2Q562F6 1265 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 VARS2Q5ST30 1063 aaKnown RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 TMC7Q7Z402 723 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SPRED2Q7Z698 418 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 UNC93AQ86WB7 457 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM173Q86WV6 379 aaPredicted RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 DCP1BQ8IZD4 617 aaKnown RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 MICALL1Q8N3F8 863 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 OR8K1Q8NGG5 319 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SHC3Q92529 594 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 PPP2R3CQ969Q6 453 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 TMEM176AQ96HP8 235 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 HEXIM2Q96MH2 286 aaKnown RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 KREMEN1Q96MU8 473 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 SYT15Q9BQS2 421 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 MRPL45Q9BRJ2 306 aaKnown RBP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 C17orf80Q9BSJ5 609 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 MED10Q9BTT4 135 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 GPR62Q9BZJ7 368 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 TLR9Q9NR96 1032 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
HDAC6-216ENST00000468949 THEGQ9P2T0 379 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 HESX1Q9UBX0 185 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 CDH9Q9ULB4 789 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 LZTS1Q9Y250 596 aa8.65□□□□□ -1.02
HDAC6-216ENST00000468949 ARIH1Q9Y4X5 557 aaPredicted RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms