RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 UAP1Q16222 522 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FAM153CQ494X1 144 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SLC9C1Q4G0N8 1177 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RRAGBQ5VZM2 374 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FAM91A1Q658Y4 838 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 ANKRD34AQ69YU3 496 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 KRT40Q6A162 431 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NFRKBQ6P4R8 1299 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NEK10Q6ZWH5 1172 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GET4Q7L5D6 327 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 VN1R5Q7Z5H4 357 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CLEC10AQ8IUN9 316 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 ERI1Q8IV48 349 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RHOT2Q8IXI1 618 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RAVER1Q8IY67 606 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 LSMEM2Q8N112 164 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SHISA5Q8N114 240 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 RASGEF1CQ8N431 466 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FITM2Q8N6M3 262 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 KBTBD3Q8NAB2 608 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 ACMSDQ8TDX5 336 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PYROXD1Q8WU10 500 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NELFBQ8WX92 580 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 JADE3Q92613 823 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PRCCQ92733 491 aaPredicted RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NXPE3Q969Y0 559 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 NACC2Q96BF6 587 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PAGE5Q96GU1 130 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CFAP57Q96MR6 1250 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 HAUS7Q99871 368 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PRMT1Q99873 361 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SENP7Q9BQF6 1050 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 BTBD10Q9BSF8 475 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TBC1D10AQ9BXI6 508 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PITPNM3Q9BZ71 974 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TXLNGYQ9BZA5 131 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FOXP3Q9BZS1 431 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 VPS16Q9H269 839 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 ZNF408Q9H9D4 720 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 C17orf75Q9HAS0 396 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 OSGEPQ9NPF4 335 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GPR108Q9NPR9 543 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PFDN4Q9NQP4 134 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 ATAD3AQ9NVI7 634 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GID8Q9NWU2 228 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 SIRPGQ9P1W8 387 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 FAM153AQ9UHL3 310 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 DNAJC12Q9UKB3 198 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 HDAC9Q9UKV0 1011 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 GIT1Q9Y2X7 761 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TSC22D4Q9Y3Q8 395 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 TELO2Q9Y4R8 837 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PARP4Q9UKK3 1724 aaKnown RBP5.13□□□□□ -1.59
SF3B1-207ENST00000468925 CPDO75976 1380 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 A2ML1A8K2U0 1454 aa5.13□□□□□ -1.59
SF3B1-207ENST00000468925 PIK3C2BO00750 1634 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 KLF18A0A0U1RQI7 1052 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 LOC100289279A0A1B0GTE1 492 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 PRR19A6NJB7 356 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TRIM75PA6NK02 468 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 GOLGA8BA8MQT2 603 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 E9PMD0 336 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CAPN9O14815 690 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 FZD6O60353 706 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 OPHN1O60890 802 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CNOT3O75175 753 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 DDX58O95786 925 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 DLGAP3O95886 979 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SERPING1P05155 500 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 RXRAP19793 462 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 M6PRP20645 277 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 BDNFP23560 247 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ECHS1P30084 290 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 STX2P32856 288 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TTKP33981 857 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 COPB2P35606 906 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 METAP2P50579 478 aaKnown RBP eCLIP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TUBP50607 506 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CHN2P52757 468 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 RTP1P59025 263 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 RELAQ04206 551 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 SSRP1Q08945 709 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TBL3Q12788 808 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ARHGEF6Q15052 776 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 EZH2Q15910 746 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 DDB1Q16531 1140 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 P3H1Q32P28 736 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 DNAL1Q4LDG9 190 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TCERG1LQ5VWI1 586 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ARL6IP4Q66PJ3 421 aaKnown RBP5.12□□□□□ -1.59
SF3B1-207ENST00000468925 ALG1LQ6GMV1 187 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 NIPAL1Q6NVV3 410 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 TTC23LQ6PF05 361 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 XKR5Q6UX68 686 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CENPUQ71F23 418 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 CYFIP1Q7L576 1253 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 G2E3Q7L622 706 aa5.12□□□□□ -1.59
SF3B1-207ENST00000468925 MIER3Q7Z3K6 550 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms