RNA–Protein interactions for RNA: ENST00000468267.1

SSBP1-207, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 800 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-207ENST00000468267 CDR1P51861 262 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 NUCB2P80303 420 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TSPY1Q01534 308 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 FAM78AQ5JUQ0 283 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 CWF19L1Q69YN2 538 aaKnown RBP18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TANGO2Q6ICL3 276 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 KRBA2Q6ZNG9 492 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TRAPPC11Q7Z392 1133 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 LIMS2Q7Z4I7 341 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 DNAJB7Q7Z6W7 309 aaPredicted RBP18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TMC8Q8IU68 726 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 SHKBP1Q8TBC3 707 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 SPPL2BQ8TCT7 592 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 TMEM174Q8WUU8 243 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 PSMG2Q969U7 264 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 ELSPBP1Q96BH3 223 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 CCDC127Q96BQ5 260 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 ZSWIM3Q96MP5 696 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 CGRRF1Q99675 332 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 ACBD6Q9BR61 282 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 PLA2G2FQ9BZM2 168 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 DMAC2Q9NW81 257 aa18.37■□□□□ 0.53
SSBP1-207ENST00000468267 DDX43Q9NXZ2 648 aaKnown RBP18.37■□□□□ 0.53
SSBP1-207ENST00000468267 EXOC3O60645 756 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 ZNF202O95125 648 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 PRR29P0C7W0 189 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 GJA1P17302 382 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 AOC1P19801 751 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 FCARP24071 287 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 LHX1P48742 406 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 PTPN5P54829 565 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 MYL7Q01449 175 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 NHLH1Q02575 133 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 TCF15Q12870 199 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 DPYDQ12882 1025 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 SOWAHAQ2M3V2 549 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 MGAT5BQ3V5L5 792 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 DPH6Q7L8W6 267 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 ITIH5Q86UX2 942 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 OSTM1Q86WC4 334 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 SLC9A9Q8IVB4 645 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 ASB16Q96NS5 453 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 SEPT5Q99719 369 aaPredicted RBP18.36■□□□□ 0.53
SSBP1-207ENST00000468267 GZF1Q9H116 711 aaPredicted RBP18.36■□□□□ 0.53
SSBP1-207ENST00000468267 KCTD10Q9H3F6 313 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 ARHGEF3Q9NR81 526 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 TMLHEQ9NVH6 421 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 PCDHB5Q9Y5E4 795 aa18.36■□□□□ 0.53
SSBP1-207ENST00000468267 PDXKO00764 312 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 GABRDO14764 452 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 GALR2O43603 387 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 PI15O43692 258 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 RHOBTB3O94955 611 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 HAPLN1P10915 354 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ATF6P18850 670 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 TEAD2Q15562 447 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 NFE2Q16621 373 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ADGRF2Q8IZF7 708 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ZNF516Q92618 1163 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 SMARCD2Q92925 531 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 CCDC47Q96A33 483 aaKnown RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 GPR88Q9GZN0 384 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 TBC1D17Q9HA65 648 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ZFP14Q9HCL3 533 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ZNF334Q9HCZ1 680 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 ABI2Q9NYB9 513 aaPredicted RBP18.35■□□□□ 0.53
SSBP1-207ENST00000468267 DENND4CQ5VZ89 1909 aa18.35■□□□□ 0.53
SSBP1-207ENST00000468267 MYO15AQ9UKN7 3530 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 A0A1W2PRU2 124 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 STK25O00506 426 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 FGF19O95750 216 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 CST3P01034 146 aaPredicted RBP18.34■□□□□ 0.53
SSBP1-207ENST00000468267 ACAT1P24752 427 aaKnown RBP18.34■□□□□ 0.53
SSBP1-207ENST00000468267 PFKPQ01813 784 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 VEPH1Q14D04 833 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
SSBP1-207ENST00000468267 PHLDB3Q6NSJ2 640 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 GAREM2Q75VX8 874 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 FAM200AQ8TCP9 573 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 PKMYT1Q99640 499 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 LPIN3Q9BQK8 851 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 TRPV4Q9HBA0 871 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 USP34Q70CQ2 3546 aa18.34■□□□□ 0.53
SSBP1-207ENST00000468267 ZFHX2Q9C0A1 2572 aaPredicted RBP18.34■□□□□ 0.53
SSBP1-207ENST00000468267 DMDP11532 3685 aa18.33■□□□□ 0.53
SSBP1-207ENST00000468267 PCSK1P29120 753 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 STARD6P59095 220 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 CLDN10P78369 228 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 SLC44A4Q53GD3 710 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 ZSCAN18Q8TBC5 510 aaPredicted RBP18.33■□□□□ 0.52
SSBP1-207ENST00000468267 PLEKHO2Q8TD55 490 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 PARD3BQ8TEW8 1205 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 KBTBD7Q8WVZ9 684 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 SHDQ96IW2 340 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 PI4K2AQ9BTU6 479 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 ABCB6Q9NP58 842 aa18.33■□□□□ 0.52
SSBP1-207ENST00000468267 HCRTO43612 131 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 KIF20AO95235 890 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 NR3C1P04150 777 aa18.32■□□□□ 0.52
SSBP1-207ENST00000468267 RFX1P22670 979 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms