RNA–Protein interactions for RNA: ENST00000467731.1

SCAF4-204, Transcript of SR-related CTD associated factor 4, humanhuman

TSL 1 (best)

Gene SCAF4, Length 2,976 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-204ENST00000467731 TKTP29401 623 aaKnown RBP7.32□□□□□ -1.24
SCAF4-204ENST00000467731 NDST1P52848 882 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 ORC1Q13415 861 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 WDR59Q6PJI9 974 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 SPRED2Q7Z698 418 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 SLC39A11Q8N1S5 342 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 OR6B3Q8NGW1 331 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 WHAMMQ8TF30 809 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 TMEM169Q96HH4 297 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 B3GALT6Q96L58 329 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 TWNKQ96RR1 684 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 PAIP2Q9BPZ3 127 aaKnown RBP7.32□□□□□ -1.24
SCAF4-204ENST00000467731 NUCKS1Q9H1E3 243 aaKnown RBP7.32□□□□□ -1.24
SCAF4-204ENST00000467731 AIPL1Q9NZN9 384 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 SUFUQ9UMX1 484 aa7.32□□□□□ -1.24
SCAF4-204ENST00000467731 LINC01553A4QN01 128 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 ARHGEF15O94989 841 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CALCAP01258 141 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PAX3P23760 479 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 BMP8BP34820 402 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PBX2P40425 430 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 YWHAEP62258 255 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 MLLT1Q03111 559 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 TERF2Q15554 542 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 TSR1Q2NL82 804 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 FAM171A1Q5VUB5 890 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 ARMCX6Q7L4S7 300 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 IRF2BP2Q7Z5L9 587 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SLC47A2Q86VL8 602 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 OSTM1Q86WC4 334 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CEP57Q86XR8 500 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 LRRC8AQ8IWT6 810 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 TDHQ8IZJ6 230 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 TMEM86AQ8N2M4 240 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 RBBP8NLQ8NC74 664 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 VN1R3Q9BXE9 311 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CNTN6Q9UQ52 1028 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PCDHB12Q9Y5F1 795 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 KLHL33A6NCF5 533 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 A8MXQ7 604 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 GABRDO14764 452 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CYP11A1P05108 521 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PLEKP08567 350 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PDGFRBP09619 1106 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SKILP12757 684 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 HNRNPH3P31942 346 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 GNL1P36915 607 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 ZNF132P52740 706 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 RAD23BP54727 409 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 YWHAHQ04917 246 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 MEA1Q16626 185 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 ZC3H12AQ5D1E8 599 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 DNAJC21Q5F1R6 531 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CHRDL2Q6WN34 429 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 TAS1R1Q7RTX1 841 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SLC4A11Q8NBS3 891 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SYN2Q92777 582 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PANX2Q96RD6 677 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 CHP1Q99653 195 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 C17orf80Q9BSJ5 609 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 NT5C1AQ9BXI3 368 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PBX4Q9BYU1 374 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SNX25Q9H3E2 840 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 DPEP3Q9H4B8 488 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 FAM124BQ9H5Z6 455 aaPredicted RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 AAASQ9NRG9 546 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 DDX43Q9NXZ2 648 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 SPG21Q9NZD8 308 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 DSEQ9UL01 958 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 MTUS1Q9ULD2 1270 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PCDHB8Q9UN66 801 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 STXBP5LQ9Y2K9 1186 aa7.31□□□□□ -1.24
SCAF4-204ENST00000467731 YBX2Q9Y2T7 364 aaKnown RBP7.31□□□□□ -1.24
SCAF4-204ENST00000467731 PTPRDP23468 1912 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PRUNE2Q8WUY3 3088 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 SYN3O14994 580 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 FGF18O76093 207 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 EFEMP2O95967 443 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 CYP11B1P15538 503 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 FERP16591 822 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 WARSP23381 471 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ACAT1P24752 427 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 PPM1AP35813 382 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ELAVL2Q12926 359 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ASIC2Q16515 512 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TDRD12Q587J7 1177 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 RTP2Q5QGT7 225 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 SWT1Q5T5J6 900 aaKnown RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 OVOS1Q6IE37 1185 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 UNC93AQ86WB7 457 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 FMNL3Q8IVF7 1028 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 RNF168Q8IYW5 571 aaPredicted RBP7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TTC39CQ8N584 583 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 C12orf29Q8N999 325 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 EPS8L1Q8TE68 723 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 TMEM176AQ96HP8 235 aa7.3□□□□□ -1.24
SCAF4-204ENST00000467731 ELOVL4Q9GZR5 314 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms