RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 PEAR1Q5VY43 1037 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 TOGARAM2Q6ZUX3 1019 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 NEK8Q86SG6 692 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 POTEDQ86YR6 584 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 ZNF843Q8N446 348 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 CCDC33Q8N5R6 958 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 FRMD1Q8N878 549 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 TTC16Q8NEE8 873 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 MCPH1Q8NEM0 835 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 OLIG1Q8TAK6 271 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 PIGOQ8TEQ8 1089 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 HAS1Q92839 578 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 C18orf25Q96B23 403 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 ZMAT2Q96NC0 199 aaKnown RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 LPIN3Q9BQK8 851 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 SLC46A2Q9BY10 475 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 ECT2Q9H8V3 914 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 MMP17Q9ULZ9 603 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 TIMM13Q9Y5L4 95 aaPredicted RBP11.18□□□□□ -0.62
HDAC3-203ENST00000467533 TSC2P49815 1807 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 CFAP46Q8IYW2 2715 aa11.18□□□□□ -0.62
HDAC3-203ENST00000467533 OR6C75A6NL08 312 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ARHGAP33O14559 1287 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ARHGAP6O43182 974 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 BAG4O95429 457 aaKnown RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 SYPP08247 313 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ATP2B1P20020 1258 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 GRM5P41594 1212 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 GPR17Q13304 367 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 NTRK3Q16288 839 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 TAF12Q16514 161 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 CRY1Q16526 586 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ADCK5Q3MIX3 580 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ZNF568Q3ZCX4 644 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 XKR4Q5GH76 650 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 SPDYCQ5MJ68 293 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 RABEPKQ7Z6M1 372 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 USP37Q86T82 979 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 MAB21L3Q8N8X9 362 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ATAD1Q8NBU5 361 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 RIN3Q8TB24 985 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 USP33Q8TEY7 942 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 BSNDQ8WZ55 320 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 BRF1Q92994 677 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 USP13Q92995 863 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 SEPT5Q99719 369 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ESYT1Q9BSJ8 1104 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 KIFC3Q9BVG8 833 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 OXCT2Q9BYC2 517 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 CAPN10Q9HC96 672 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 POLMQ9NP87 494 aaPredicted RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 TDP1Q9NUW8 608 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 DNAAF2Q9NVR5 837 aaKnown RBP11.17□□□□□ -0.62
HDAC3-203ENST00000467533 ZMYM5Q9UJ78 669 aa11.17□□□□□ -0.62
HDAC3-203ENST00000467533 HECTD1Q9ULT8 2610 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 A0A087WWV3 80 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 CAPN9O14815 690 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 AP5Z1O43299 807 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 IFNAR1P17181 557 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 NAMPTP43490 491 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 IFNAR2P48551 515 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 RPL6Q02878 288 aaKnown RBP11.16□□□□□ -0.62
HDAC3-203ENST00000467533 SLC14A1Q13336 389 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 BYSLQ13895 437 aaKnown RBP11.16□□□□□ -0.62
HDAC3-203ENST00000467533 MTF1Q14872 753 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 Q6ZUG5 572 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 SLFN12Q8IYM2 578 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 TRIM22Q8IYM9 498 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 PGBD3Q8N328 593 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 DEFB119Q8N690 84 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 ATP2A3Q93084 1043 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 CDT1Q9H211 546 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 IL21Q9HBE4 155 aa11.16□□□□□ -0.62
HDAC3-203ENST00000467533 DUS2Q9NX74 493 aaKnown RBP11.16□□□□□ -0.62
HDAC3-203ENST00000467533 DAXXQ9UER7 740 aaPredicted RBP11.16□□□□□ -0.62
HDAC3-203ENST00000467533 URB1O60287 2271 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 OAZ2O95190 189 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 CPA1P15085 419 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 KCNE1P15382 129 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NMT1P30419 496 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 HSPA4P34932 840 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NBR1Q14596 966 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 PPP2R5AQ15172 486 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 MGAT5BQ3V5L5 792 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NT5DC1Q5TFE4 455 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 ALKAL1Q6UXT8 129 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 TMEM92Q6UXU6 159 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 TMPRSS7Q7RTY8 843 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 SLCO6A1Q86UG4 719 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 LSM14AQ8ND56 463 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 GIPC2Q8TF65 315 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 HMGB4Q8WW32 186 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NACC1Q96RE7 527 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 HNRNPABQ99729 332 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NAP1L4Q99733 375 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 CLMPQ9H6B4 373 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 NCOA5Q9HCD5 579 aaKnown RBP11.15□□□□□ -0.62
HDAC3-203ENST00000467533 CNTN3Q9P232 1028 aa11.15□□□□□ -0.62
HDAC3-203ENST00000467533 TUBGCP4Q9UGJ1 667 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms