RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 ABCF2Q9UG63 623 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 FEZ2Q9UHY8 353 aaPredicted RBP6.08□□□□□ -1.44
ATG3-204ENST00000467275 AGAP1Q9UPQ3 857 aa6.08□□□□□ -1.44
ATG3-204ENST00000467275 WDR91A4D1P6 747 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 SLC16A6O15403 523 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 HNRNPCP07910 306 aaKnown RBP eCLIP6.07□□□□□ -1.44
ATG3-204ENST00000467275 CELA2AP08217 269 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 NDUFB7P17568 137 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 DRD4P21917 467 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 SLC10A2Q12908 348 aaPredicted RBP6.07□□□□□ -1.44
ATG3-204ENST00000467275 NOGQ13253 232 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 GRM1Q13255 1194 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 EZH2Q15910 746 aaKnown RBP6.07□□□□□ -1.44
ATG3-204ENST00000467275 TMEM119Q4V9L6 283 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 ZNF551Q7Z340 670 aaPredicted RBP6.07□□□□□ -1.44
ATG3-204ENST00000467275 HEATR3Q7Z4Q2 680 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 USP37Q86T82 979 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 FAM90A1Q86YD7 464 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 ATRIPQ8WXE1 791 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 RGMAQ96B86 450 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 ZDHHC8Q9ULC8 765 aa6.07□□□□□ -1.44
ATG3-204ENST00000467275 SETD1BQ9UPS6 1966 aaKnown RBP6.07□□□□□ -1.44
ATG3-204ENST00000467275 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 M0QYG6 137 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 SNUPNO95149 360 aaKnown RBP6.06□□□□□ -1.44
ATG3-204ENST00000467275 NXPH3O95157 252 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 ZRANB2O95218 330 aaKnown RBP eCLIP6.06□□□□□ -1.44
ATG3-204ENST00000467275 ERBB2P04626 1255 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 PDCP20941 246 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 GCLCP48506 637 aaPredicted RBP6.06□□□□□ -1.44
ATG3-204ENST00000467275 EIF2B5Q13144 721 aaKnown RBP6.06□□□□□ -1.44
ATG3-204ENST00000467275 LLGL1Q15334 1064 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 TEDDM1Q5T9Z0 273 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 CPA6Q8N4T0 437 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 SEMA6DQ8NFY4 1073 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 SCARB1Q8WTV0 552 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 DDX17Q92841 729 aaKnown RBP6.06□□□□□ -1.44
ATG3-204ENST00000467275 ZNF778Q96MU6 729 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 ARHGEF3Q9NR81 526 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 SERTAD4Q9NUC0 356 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 SPEF1Q9Y4P9 236 aa6.06□□□□□ -1.44
ATG3-204ENST00000467275 WASHC2CQ9Y4E1 1318 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 LINC01548A6NM66 108 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 FTLP02792 175 aaPredicted RBP6.05□□□□□ -1.44
ATG3-204ENST00000467275 RECQLP46063 649 aaPredicted RBP6.05□□□□□ -1.44
ATG3-204ENST00000467275 HK3P52790 923 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 VPS53Q5VIR6 699 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 KLHDC4Q8TBB5 520 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 C1QTNF7Q9BXJ2 289 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 MRPL46Q9H2W6 279 aaKnown RBP6.05□□□□□ -1.44
ATG3-204ENST00000467275 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.05□□□□□ -1.44
ATG3-204ENST00000467275 FLRT1Q9NZU1 646 aa6.05□□□□□ -1.44
ATG3-204ENST00000467275 TARM1B6A8C7 271 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 PPM1DO15297 605 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 FAM163BP0C2L3 166 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 ALDH9A1P49189 494 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 TCF15Q12870 199 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 CEP85Q6P2H3 762 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 PPP1R32Q7Z5V6 425 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 VGLL2Q8N8G2 317 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 NELL2Q99435 816 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 WDR26Q9H7D7 661 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 LMBRD1Q9NUN5 540 aa6.04□□□□□ -1.44
ATG3-204ENST00000467275 ZNF70Q9UC06 446 aaPredicted RBP6.04□□□□□ -1.44
ATG3-204ENST00000467275 PDHA1P08559 390 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 TOB1P50616 345 aaPredicted RBP6.03□□□□□ -1.44
ATG3-204ENST00000467275 TFF2Q03403 129 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 CCDC157Q569K6 752 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 ZNF618Q5T7W0 954 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 FAM160B1Q5W0V3 765 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 TMEM108Q6UXF1 575 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 ZNF782Q6ZMW2 699 aaPredicted RBP6.03□□□□□ -1.44
ATG3-204ENST00000467275 USP45Q70EL2 814 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 C1QL2Q7Z5L3 287 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 FAM109AQ8N4B1 249 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 FAM46DQ8NEK8 389 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 SH3BP4Q9P0V3 963 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 SERGEFQ9UGK8 458 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 PCDHA1Q9Y5I3 950 aa6.03□□□□□ -1.44
ATG3-204ENST00000467275 JTBO76095 146 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 AHSGP02765 367 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 MTX3Q5HYI7 312 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 SFRP4Q6FHJ7 346 aaPredicted RBP6.02□□□□□ -1.45
ATG3-204ENST00000467275 LAYNQ6UX15 382 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 SLC29A4Q7RTT9 530 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 PPP1R3BQ86XI6 285 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 PRR18Q8N4B5 295 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 FANCBQ8NB91 859 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 FAM167AQ96KS9 214 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 PUS7Q96PZ0 661 aaKnown RBP6.02□□□□□ -1.45
ATG3-204ENST00000467275 ASPSCR1Q9BZE9 553 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 TTYH3Q9C0H2 523 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 SERHLQ9NQF3 203 aa6.02□□□□□ -1.45
ATG3-204ENST00000467275 QSOX1O00391 747 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 IL33O95760 270 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 TYRP14679 529 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 JUPP14923 745 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 PCSK6P29122 969 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 MAP2K6P52564 334 aa6.01□□□□□ -1.45
ATG3-204ENST00000467275 BOP1Q14137 746 aaKnown RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms