RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 GIMAP8Q8ND71 665 aaPredicted RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 LINC01599Q8WXQ3 324 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 MRPS27Q92552 414 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 TNPO1Q92973 898 aaKnown RBP6.22□□□□□ -1.41
PTCD3-207ENST00000467273 CHMP4CQ96CF2 233 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 GPATCH3Q96I76 525 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 COX4I2Q96KJ9 171 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 KIF2CQ99661 725 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 TCF25Q9BQ70 676 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SENP7Q9BQF6 1050 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SP110Q9HB58 689 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ERVK-5Q9HDB9 667 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 GCM1Q9NP62 436 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ENTPD7Q9NQZ7 604 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 ECHDC1Q9NTX5 307 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 DUSP13Q9UII6 198 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 FBXL21Q9UKT6 434 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 HCFC2Q9Y5Z7 792 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 R4GN57 208 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 SPTBN2O15020 2390 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 IGSF9BQ9UPX0 1349 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 KDM3AQ9Y4C1 1321 aa6.22□□□□□ -1.41
PTCD3-207ENST00000467273 MYH6P13533 1939 aa6.21□□□□□ -1.41
PTCD3-207ENST00000467273 FITM1A5D6W6 292 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 M0QZ92 97 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 M0R2C6 588 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 ZGLP1P0C6A0 271 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 SP9P0CG40 484 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 SP100P23497 879 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 YARSP54577 528 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 DMWDQ09019 674 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 IFRD2Q12894 506 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 GIT2Q14161 759 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 SMC1AQ14683 1233 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PGM5Q15124 567 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 TCEAL1Q15170 157 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PAN2Q504Q3 1202 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 ASPRV1Q53RT3 343 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 CCDC178Q5BJE1 867 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PLPP4Q5VZY2 271 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 MRM1Q6IN84 353 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 VHLLQ6RSH7 139 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 RTN4RL1Q86UN2 441 aaPredicted RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 C1orf210Q8IVY1 113 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PHACTR4Q8IZ21 702 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 NME8Q8N427 588 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 MRPL43Q8N983 215 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 FEZF2Q8TBJ5 459 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PIWIL2Q8TC59 973 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 RSPH1Q8WYR4 309 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 DDX1Q92499 740 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 TBC1D5Q92609 795 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 CHAMP1Q96JM3 812 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 KRTAP9-8Q9BYQ0 159 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 LRRCC1Q9C099 1032 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 SMOC2Q9H3U7 446 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 CHMP4BQ9H444 224 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 AGO3Q9H9G7 860 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 C1orf112Q9NSG2 853 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 NCDNQ9UBB6 729 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 GPR160Q9UJ42 338 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 TUBE1Q9UJT0 475 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 DBR1Q9UK59 544 aaKnown RBP6.21□□□□□ -1.42
PTCD3-207ENST00000467273 FBXO4Q9UKT5 387 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PADI3Q9ULW8 664 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PCDHB7Q9Y5E2 793 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 PCDHGA2Q9Y5H1 932 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 IRAK3Q9Y616 596 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 SLC12A7Q9Y666 1083 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 CDY2AQ9Y6F7 541 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 ZZEF1O43149 2961 aa6.21□□□□□ -1.42
PTCD3-207ENST00000467273 RRN3P2A6NIE6 340 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 HIDE1A8MVS5 230 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 FIBPO43427 364 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 CFBP00751 764 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 MYCLP12524 364 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 CD52P31358 61 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 SHC2P98077 582 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 PPFIA1Q13136 1202 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ALX1Q15699 326 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 CYP26C1Q6V0L0 522 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 C15orf39Q6ZRI6 1047 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 CCDC149Q6ZUS6 474 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 SLC24A5Q71RS6 500 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 PPFIBP1Q86W92 1011 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 DGKHQ86XP1 1220 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ADGRF4Q8IZF3 695 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 PANK1Q8TE04 598 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 DNAJB3Q8WWF6 145 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 SGSM3Q96HU1 749 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 INPP4AQ96PE3 977 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 AMNQ9BXJ7 453 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 RHOBTB2Q9BYZ6 727 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 TRIT1Q9H3H1 467 aaKnown RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ZNF552Q9H707 407 aaPredicted RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ELAC1Q9H777 363 aaKnown RBP6.2□□□□□ -1.42
PTCD3-207ENST00000467273 TMEM161AQ9NX61 479 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 ERAP1Q9NZ08 941 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 DLGAP2Q9P1A6 1054 aa6.2□□□□□ -1.42
PTCD3-207ENST00000467273 STK39Q9UEW8 545 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms