RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 CCDC66A2RUB6 948 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 MOXD2PA6NHM9 499 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CCDC188H7C350 402 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PGRMC1O00264 195 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PIRO00625 290 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 GPR182O15218 404 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TLR3O15455 904 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CEP104O60308 925 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 RPS6KA5O75582 802 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TRPA1O75762 1119 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CALCAP01258 141 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CFHP08603 1231 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 VDRP11473 427 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 ELNP15502 786 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 COMTP21964 271 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 RRM1P23921 792 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 BRD2P25440 801 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CTNNA1P35221 906 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PNPLA4P41247 253 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PEX5P50542 639 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 GSCP56915 257 aaPredicted RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TNNC1P63316 161 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TAP1Q03518 808 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 C2orf54Q08AI8 447 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PTK7Q13308 1070 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 STILQ15468 1287 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CNGA2Q16280 664 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PPP2R5EQ16537 467 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TMCO3Q6UWJ1 677 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SCARA5Q6ZMJ2 495 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 LIMS2Q7Z4I7 341 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 UNC93AQ86WB7 457 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 HACE1Q8IYU2 909 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SLC4A11Q8NBS3 891 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SMG8Q8ND04 991 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 CD99L2Q8TCZ2 262 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 RAET1EQ8TD07 263 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TFAP2BQ92481 460 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TMEM176AQ96HP8 235 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 MS4A14Q96JA4 679 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PNKPQ96T60 521 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 NAP1L3Q99457 506 aaPredicted RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 ZSWIM1Q9BR11 485 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 EPC1Q9H2F5 836 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 NXF3Q9H4D5 531 aaKnown RBP10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SMYD3Q9H7B4 428 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PARVAQ9NVD7 372 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 SAGE1Q9NXZ1 904 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 STRIP2Q9ULQ0 834 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 IPPQ9Y573 584 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 PCDHA3Q9Y5H8 950 aa10.13□□□□□ -0.79
APOBEC1-202ENST00000467171 TCRBV5S1A1TA0A578 114 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 MYO1FO00160 1098 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 NRG2O14511 850 aaPredicted RBP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 FKTNO75072 461 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ZNF623O75123 536 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ERLIN1O75477 346 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 PROSCO94903 275 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ZRANB2O95218 330 aaKnown RBP eCLIP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 CHRNA1P02708 482 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 RHOXF2BP0C7M4 288 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 HSPA6P17066 643 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 LRPAP1P30533 357 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 GUCY2FP51841 1108 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 CDH8P55286 799 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 MAMLD1Q13495 774 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 MESDQ14696 234 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 TRIM71Q2Q1W2 868 aaKnown RBP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM47CQ5HY64 1035 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 C9orf57Q5W0N0 161 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 CC2D1AQ6P1N0 951 aaPredicted RBP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 MMS22LQ6ZRQ5 1243 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 FAM43BQ6ZT52 329 aaPredicted RBP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 PASD1Q8IV76 773 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 WDTC1Q8N5D0 677 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 WNT8BQ93098 351 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ZNF560Q96MR9 790 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 RHOXF2Q9BQY4 288 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 C11orf70Q9BRQ4 267 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 SEZ6LQ9BYH1 1024 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ELOVL4Q9GZR5 314 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ERVK-5Q9HDB9 667 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ARFGAP3Q9NP61 516 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 RBM12Q9NTZ6 932 aaKnown RBP10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 GDAP2Q9NXN4 497 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 WDR35Q9P2L0 1181 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 ST3GAL5Q9UNP4 418 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 HES2Q9Y543 173 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 SCN10AQ9Y5Y9 1956 aa10.12□□□□□ -0.79
APOBEC1-202ENST00000467171 O00370 1275 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 SPOPO43791 374 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 CD19P15391 556 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 AKAP5P24588 427 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 TNFRSF8P28908 595 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 RAP1GAPP47736 663 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 VEGFBP49765 207 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 RAB27AP51159 221 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 DNA2P51530 1060 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 VSNL1P62760 191 aa10.11□□□□□ -0.79
APOBEC1-202ENST00000467171 ITGA7Q13683 1181 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms