RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 OFD1O75665 1012 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 CELA2AP08217 269 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 PPP3CBP16298 524 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 MALP21145 153 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 MC2RQ01718 297 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 PIGFQ07326 219 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 NOGQ13253 232 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 MLC1Q15049 377 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 KHDC1Q4VXA5 237 aaKnown RBP5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 IFIT1BQ5T764 474 aaKnown RBP5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 OVCH2Q7RTZ1 564 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 C14orf80Q86SX3 495 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 FAM90A1Q86YD7 464 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 TMIEQ8NEW7 156 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 TCEAL9Q9UHQ7 104 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 SLC45A2Q9UMX9 530 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 WNT6Q9Y6F9 365 aa5.71□□□□□ -1.5
PRPF40A-205ENST00000467114 MANSC4A6NHS7 340 aaPredicted RBP5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 LINC00473A8K010 186 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 KRTAP29-1A8MX34 341 aaPredicted RBP5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 F2RL2O00254 374 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 TUSC2O75896 110 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ANXA1P04083 346 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 PRKCGP05129 697 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 CD1AP06126 327 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 CHRM2P08172 466 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 HSPA6P17066 643 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ITGB6P18564 788 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ZNF81P51508 661 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 HNRNPMP52272 730 aaKnown RBP eCLIP5.7□□□□□ -1.54e-11■■■■■ 42.4
PRPF40A-205ENST00000467114 NXPH1P58417 271 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ITIH3Q06033 890 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 PREPLQ4J6C6 727 aaPredicted RBP5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 PDPRQ8NCN5 879 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 NSUN7Q8NE18 718 aaKnown RBP5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ZNF778Q96MU6 729 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 MAP3K14Q99558 947 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 CGRRF1Q99675 332 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 VRK1Q99986 396 aaPredicted RBP5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 KLC4Q9NSK0 619 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 ADAM21Q9UKJ8 722 aa5.7□□□□□ -1.5
PRPF40A-205ENST00000467114 VWC2LB2RUY7 222 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 GCOM1H8Y6P7 765 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 TOR1BO14657 336 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 DTNBO60941 627 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 U2AF1L5P0DN76 240 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 AGFG1P52594 562 aaKnown RBP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 U2AF1Q01081 240 aaKnown RBP eCLIP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 GBX1Q14549 363 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 FCRLBQ6BAA4 426 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 CHST15Q7LFX5 561 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 C3orf20Q8ND61 904 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 SLC17A8Q8NDX2 589 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 PPP1R35Q8TAP8 253 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 RGMAQ96B86 450 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 C8orf48Q96LL4 319 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 IMPG2Q9BZV3 1241 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 ZNF70Q9UC06 446 aaPredicted RBP5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 POLHQ9Y253 713 aa5.69□□□□□ -1.5
PRPF40A-205ENST00000467114 A0A088AWK7 358 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 UBXN7O94888 489 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 CT47B1P0C2W7 299 aaPredicted RBP5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 TYRP14679 529 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 PRDX5P30044 214 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 MINDY4Q4G0A6 757 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 TAPT1Q6NXT6 567 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 AMIGO2Q86SJ2 522 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 KIAA0319LQ8IZA0 1049 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 AOPEPQ8N6M6 819 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 B3GALNT2Q8NCR0 500 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 POC1BQ8TC44 478 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 PBKQ96KB5 322 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 HAPLN3Q96S86 360 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 SIDT1Q9NXL6 827 aaKnown RBP5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 FLRT1Q9NZU1 646 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 DDX20Q9UHI6 824 aaKnown RBP5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 SPATA31A3Q5VYP0 1347 aa5.68□□□□□ -1.5
PRPF40A-205ENST00000467114 E9PLN8 166 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 ERC2O15083 957 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 RPLP2P05387 115 aaKnown RBP5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 FTH1P19P0C7X4 201 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 NPTX2P47972 431 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 LCE1AQ5T7P2 110 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 THEMIS2Q5TEJ8 643 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 ZNF425Q6IV72 752 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 SWSAP1Q6NVH7 229 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 SLC4A10Q6U841 1118 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 PDSS2Q86YH6 399 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 DENND1CQ8IV53 801 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 GRAMD1CQ8IYS0 662 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 ZBTB34Q8NCN2 500 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 DDB2Q92466 427 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 LRGUKQ96M69 825 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 TRIB1Q96RU8 372 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 VKORC1Q9BQB6 163 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 TMEM60Q9H2L4 133 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 OBP2AQ9NY56 170 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 ST3GAL5Q9UNP4 418 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 PCDHA3Q9Y5H8 950 aa5.67□□□□□ -1.5
PRPF40A-205ENST00000467114 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms