RNA–Protein interactions for RNA: ENST00000467062.5

SNAPC3-205, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-205ENST00000467062 SSTR3P32745 418 aaPredicted RBP19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 RPL21P46778 160 aaKnown RBP19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 WDR72Q3MJ13 1102 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 SLC39A4Q6P5W5 647 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 FAM47EQ6ZV65 393 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 SPATA24Q86W54 205 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 C4orf19Q8IY42 314 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 MTMR14Q8NCE2 650 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 JDP2Q8WYK2 163 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 PCDH18Q9HCL0 1135 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 RNF146Q9NTX7 359 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 RBBP6Q7Z6E9 1792 aaKnown RBP19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 PABPC4LP0CB38 370 aaKnown RBP19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 GPC5P78333 572 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 TMED1Q13445 227 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 PRKG1Q13976 671 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 TMEM259Q4ZIN3 620 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 LLGL2Q6P1M3 1020 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 CYFIP1Q7L576 1253 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 SMYD1Q8NB12 490 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 WDR60Q8WVS4 1066 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 POMGNT1Q8WZA1 660 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 LPAR1Q92633 364 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 CLMNQ96JQ2 1002 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 KMT5AQ9NQR1 393 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 TBC1D30Q9Y2I9 924 aa19.02■□□□□ 0.64
SNAPC3-205ENST00000467062 TBX10O75333 385 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 CBX6O95503 412 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 HNRNPCP07910 306 aaKnown RBP eCLIP19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 NR3C2P08235 984 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 ETS2P15036 469 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 CHRNA3P32297 505 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 HMGCS2P54868 508 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 MPP2Q14168 576 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 RFWD3Q6PCD5 774 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 IRGQQ8WZA9 623 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 HAUS1Q96CS2 278 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 METTL5Q9NRN9 209 aaKnown RBP19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 PTPN22Q9Y2R2 807 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 UMODL1Q5DID0 1318 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 ZBED4O75132 1171 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 E2F6O75461 281 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 RGS20O76081 388 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 SPATA31D3P0C874 917 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 PYGMP11217 842 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 VAV1P15498 845 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 YY1P25490 414 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 PTGIRP43119 386 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 KCNJ1P48048 391 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 DMP1Q13316 513 aaPredicted RBP19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 SNRNP48Q6IEG0 339 aaKnown RBP19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 SPATA31D4Q6ZUB0 917 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 ZNF554Q86TJ5 538 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 TUBGCP5Q96RT8 1024 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 NDUFA13Q9P0J0 144 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 HSFX1Q9UBD0 423 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 SH3GLB1Q9Y371 365 aa19.01■□□□□ 0.63
SNAPC3-205ENST00000467062 hCG_2014768A0A024R1R8 64 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19■□□□□ 0.63
SNAPC3-205ENST00000467062 MAGEB2O15479 319 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 MAFGO15525 162 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 PHF2O75151 1096 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 ZBTB7AO95365 584 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 HSPA6P17066 643 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 NCKAP1LP55160 1127 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 FMO1Q01740 532 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 ACSBG2Q5FVE4 666 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 NLRX1Q86UT6 975 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 LRRC43Q8N309 656 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 FAM213AQ9BRX8 229 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 PHTF1Q9UMS5 762 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 HNRNPDLO14979 420 aaKnown RBP19■□□□□ 0.63
SNAPC3-205ENST00000467062 ATP9BO43861 1147 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 CCDC22O60826 627 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 KRT5P13647 590 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 FOXN2P32314 431 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 HPCAP84074 193 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 MOGSQ13724 837 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 DSTYKQ6XUX3 929 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 NIPA1Q7RTP0 329 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 MICALL2Q8IY33 904 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 FAM71AQ8IYT1 594 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19■□□□□ 0.63
SNAPC3-205ENST00000467062 NUP85Q9BW27 656 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 TUBGCP4Q9UGJ1 667 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 ANGPTL2Q9UKU9 493 aa19■□□□□ 0.63
SNAPC3-205ENST00000467062 CYP11B1P15538 503 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 ZFXP17010 805 aaPredicted RBP18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 MYBPC2Q14324 1141 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 R3HDM1Q15032 1099 aaKnown RBP18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 TTC27Q6P3X3 843 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 SV2AQ7L0J3 742 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 HELQQ8TDG4 1101 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 TUBB6Q9BUF5 446 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 KRT82Q9NSB4 513 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 ZFP69BQ9UJL9 534 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 PCDHA10Q9Y5I2 948 aa18.99■□□□□ 0.63
SNAPC3-205ENST00000467062 A0A0J9YVX5 310 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms