RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 SPECC1LQ69YQ0 1117 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 GJB7Q6PEY0 223 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 PRSS55Q6UWB4 352 aaPredicted RBP16.21■□□□□ 0.19
NPHP4-205ENST00000466897 VSTM4Q8IW00 320 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 CRYBG2Q8N1P7 616 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 OR6B3Q8NGW1 331 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 OR10T2Q8NGX3 314 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 WHAMMQ8TF30 809 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 KAT5Q92993 513 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 TNIP3Q96KP6 325 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 CLSTN3Q9BQT9 956 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 NT5C1AQ9BXI3 368 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 EMILIN2Q9BXX0 1053 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 STK33Q9BYT3 514 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 ZCWPW1Q9H0M4 648 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 MAFFQ9ULX9 164 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 MYO6Q9UM54 1294 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 NME7Q9Y5B8 376 aa16.21■□□□□ 0.19
NPHP4-205ENST00000466897 MYH10P35580 1976 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 PATJQ8NI35 1801 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 A8MXQ7 604 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 ADH1AP07327 375 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 CNPP09543 421 aaKnown RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 IRS1P35568 1242 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 ZNF75DP51815 510 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 ZNF132P52740 706 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 NDST1P52848 882 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 JAM2P57087 298 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 POLR2FP61218 127 aaKnown RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 TSPY1Q01534 308 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 RAB33AQ14088 237 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 TRIM14Q14142 442 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 GRIN2CQ14957 1233 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 MAPRE1Q15691 268 aaKnown RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 PLPP4Q5VZY2 271 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 FMNL3Q8IVF7 1028 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 CDCA3Q99618 268 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 PKMYT1Q99640 499 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 SYT15Q9BQS2 421 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 GPR88Q9GZN0 384 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 GRPEL1Q9HAV7 217 aa16.2■□□□□ 0.18
NPHP4-205ENST00000466897 AJAP1Q9UKB5 411 aaPredicted RBP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.2■□□□□ 0.18
NPHP4-205ENST00000466897 HIDE1A8MVS5 230 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 F8VZ95 297 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 RFXAPO00287 272 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 C2CD2LO14523 706 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 TEX28O15482 410 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 PAEPP09466 180 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 CD58P19256 250 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 LMO2P25791 158 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 GPR17Q13304 367 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 DRAP1Q14919 205 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-205ENST00000466897 TPGS2Q68CL5 300 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 FAM171BQ6P995 826 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 RSPO2Q6UXX9 243 aaPredicted RBP16.19■□□□□ 0.18
NPHP4-205ENST00000466897 PPFIBP1Q86W92 1011 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 FAM71AQ8IYT1 594 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 DCP1BQ8IZD4 617 aaKnown RBP16.19■□□□□ 0.18
NPHP4-205ENST00000466897 B3GALNT2Q8NCR0 500 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 MICAL1Q8TDZ2 1067 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 C2orf15Q8WU43 125 aaKnown RBP16.19■□□□□ 0.18
NPHP4-205ENST00000466897 AUTS2Q8WXX7 1259 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 PPP2R3CQ969Q6 453 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 TMEM176AQ96HP8 235 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 KLHL5Q96PQ7 755 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 PRDM12Q9H4Q4 367 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 HSFX1Q9UBD0 423 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 HMGXB4Q9UGU5 601 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 KIAA1257Q9ULG3 409 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 CDY1Q9Y6F8 540 aa16.19■□□□□ 0.18
NPHP4-205ENST00000466897 ABLIM3O94929 683 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 CDC25BP30305 580 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 RAD23BP54727 409 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 ROR1Q01973 937 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 RAPGEF1Q13905 1077 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 NFE2Q16621 373 aaPredicted RBP16.18■□□□□ 0.18
NPHP4-205ENST00000466897 ARHGAP44Q17R89 818 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 TMEM270Q6UE05 265 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 CACNA2D4Q7Z3S7 1137 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 SLC4A11Q8NBS3 891 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 ZNF461Q8TAF7 563 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 MYCBPAPQ8TBZ2 947 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 BAP1Q92560 729 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 TWNKQ96RR1 684 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 ELOVL4Q9GZR5 314 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 NUCKS1Q9H1E3 243 aaKnown RBP16.18■□□□□ 0.18
NPHP4-205ENST00000466897 NSUN3Q9H649 340 aaKnown RBP16.18■□□□□ 0.18
NPHP4-205ENST00000466897 ABCB6Q9NP58 842 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 PCDHB4Q9Y5E5 795 aa16.18■□□□□ 0.18
NPHP4-205ENST00000466897 GREB1Q4ZG55 1949 aa16.17■□□□□ 0.18
NPHP4-205ENST00000466897 MYO7AQ13402 2215 aa16.17■□□□□ 0.18
NPHP4-205ENST00000466897 WDR27A2RRH5 827 aa16.17■□□□□ 0.18
NPHP4-205ENST00000466897 ADAM12O43184 909 aa16.17■□□□□ 0.18
NPHP4-205ENST00000466897 PDGFRBP09619 1106 aa16.17■□□□□ 0.18
NPHP4-205ENST00000466897 PTPN1P18031 435 aaKnown RBP16.17■□□□□ 0.18
NPHP4-205ENST00000466897 ACAT1P24752 427 aaKnown RBP16.17■□□□□ 0.18
NPHP4-205ENST00000466897 OR1D2P34982 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms