RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 FYB2Q5VWT5 728 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TDRD10Q5VZ19 366 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 CC2D2BQ6DHV5 1058 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 SPOCD1Q6ZMY3 1216 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TAS1R3Q7RTX0 852 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 NRG4Q8WWG1 115 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 PTPRN2Q92932 1015 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 AKT1S1Q96B36 256 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 PRR11Q96HE9 360 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 VCPIP1Q96JH7 1222 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR83Q9BRX9 315 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 NTPCRQ9BSD7 190 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 TMEM121Q9BTD3 319 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 ANKEF1Q9NU02 776 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 SLC17A7Q9P2U7 560 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 SHOC2Q9UQ13 582 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 DRG1Q9Y295 367 aaKnown RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 RGPD3A6NKT7 1758 aaPredicted RBP13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 RGPD4Q7Z3J3 1758 aa13.69□□□□□ -0.22
PDZRN3-205ENST00000466780 COL2A1P02458 1487 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 VNN1O95497 513 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 PIK3CAP42336 1068 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SESN3P58005 492 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 INHBEP58166 350 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SGSM1Q2NKQ1 1148 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 TSNAXIP1Q2TAA8 658 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 MSS51Q4VC12 460 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 BRDTQ58F21 947 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 TMEM270Q6UE05 265 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 TRIM72Q6ZMU5 477 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 TCP10LQ8TDR4 215 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SPIRE2Q8WWL2 714 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 ZBTB10Q96DT7 871 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 RBM41Q96IZ5 413 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SENP7Q9BQF6 1050 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 PPCSQ9HAB8 311 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 TBC1D22BQ9NU19 505 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SCINQ9Y6U3 715 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 COL11A2P13942 1736 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 CLRN2A0PK11 232 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 GOLGA8RI6L899 631 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 LMNAP02545 664 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 C4BPAP04003 597 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 ICAM1P05362 532 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 FESP07332 822 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 GNA15P30679 374 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 CETN2P41208 172 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 PTGER2P43116 358 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 CLDN10P78369 228 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 KLC1Q07866 573 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 MUM1Q2TAK8 710 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 ANKRD22Q5VYY1 191 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 SAMD3Q8N6K7 520 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 KLF6Q99612 283 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 DHRS4Q9BTZ2 278 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 HEY2Q9UBP5 337 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 IP6K2Q9UHH9 426 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 FEM1BQ9UK73 627 aa13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 FARP1Q9Y4F1 1045 aaPredicted RBP13.68□□□□□ -0.22
PDZRN3-205ENST00000466780 hCG_1818297A0A087WSY0 165 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 CFAP69A5D8W1 941 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 TMEM191CA6NGB0 347 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 F8VP50 259 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 NVLO15381 856 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 GSC2O15499 205 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 HNRNPCL1O60812 293 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 NPTXRO95502 500 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 IFNB1P01574 187 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 TMEM191BP0C7N4 346 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 TROVE2P10155 538 aaKnown RBP eCLIP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 EIF2AK2P19525 551 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 GARTP22102 1010 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 PSMC4P43686 418 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 OGDHQ02218 1023 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 C1QBPQ07021 282 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 CUL2Q13617 745 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 RCN1Q15293 331 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 ACSBG2Q5FVE4 666 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 FNBP1LQ5T0N5 605 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 TMEM154Q6P9G4 183 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 ADGRD1Q6QNK2 874 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 UCMAQ8WVF2 138 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 NKD2Q969F2 451 aaPredicted RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 BTBD10Q9BSF8 475 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 PCDH9Q9HC56 1237 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 ALG13Q9NP73 1137 aaKnown RBP13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 STOML1Q9UBI4 398 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 PCDHB4Q9Y5E5 795 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 A0A0G2JND7 137 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 LRRD1A4D1F6 860 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 CCDC22O60826 627 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 KRT36O76013 467 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 HAUS5O94927 633 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 CAP2P40123 477 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 MXRA7P84157 204 aa13.67□□□□□ -0.22
PDZRN3-205ENST00000466780 MCL1Q07820 350 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms