RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 THG1LQ9NWX6 298 aaKnown RBP18.86■□□□□ 0.61
COL7A1-206ENST00000466591 DDX43Q9NXZ2 648 aaKnown RBP18.86■□□□□ 0.61
COL7A1-206ENST00000466591 FAM13BQ9NYF5 915 aa18.86■□□□□ 0.61
COL7A1-206ENST00000466591 SNX9Q9Y5X1 595 aa18.86■□□□□ 0.61
COL7A1-206ENST00000466591 TCHHQ07283 1943 aa18.86■□□□□ 0.61
COL7A1-206ENST00000466591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-206ENST00000466591 ZNF233A6NK53 670 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 CUTAO60888 179 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 RPS9P46781 194 aaKnown RBP18.85■□□□□ 0.61
COL7A1-206ENST00000466591 ME1P48163 572 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 CYP4F8P98187 520 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 LRRC32Q14392 662 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 STXBP5Q5T5C0 1151 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 MSANTD3Q96H12 275 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 PI4K2AQ9BTU6 479 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 MTMR12Q9C0I1 747 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 NCDNQ9UBB6 729 aa18.85■□□□□ 0.61
COL7A1-206ENST00000466591 MORC2Q9Y6X9 1032 aaPredicted RBP18.85■□□□□ 0.61
COL7A1-206ENST00000466591 A0A087X0B3 334 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 SLC38A8A6NNN8 435 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 CHADO15335 359 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 YEATS4O95619 227 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 CCNE1P24864 410 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 AVPR1AP37288 418 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 ZNF528Q3MIS6 628 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 ARHGAP29Q52LW3 1261 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 POTEHQ6S545 545 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 SPATA2LQ8IUW3 424 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-206ENST00000466591 TMEM86AQ8N2M4 240 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 PDCL2Q8N4E4 241 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 LRRC52Q8N7C0 313 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 TTC16Q8NEE8 873 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 TTC8Q8TAM2 541 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 MRPS31Q92665 395 aaKnown RBP18.84■□□□□ 0.61
COL7A1-206ENST00000466591 STRA6Q9BX79 667 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 TASP1Q9H6P5 420 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 C8orf33Q9H7E9 229 aaPredicted RBP18.84■□□□□ 0.61
COL7A1-206ENST00000466591 LMAN1LQ9HAT1 526 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 PDE11AQ9HCR9 933 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 TRPV5Q9NQA5 729 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 ZMYM5Q9UJ78 669 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 COL4A3Q01955 1670 aa18.84■□□□□ 0.61
COL7A1-206ENST00000466591 FRMD3A2A2Y4 597 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 HAPLN1P10915 354 aaPredicted RBP18.83■□□□□ 0.6
COL7A1-206ENST00000466591 ATF6P18850 670 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 PCSK1P29120 753 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 RPL10AP62906 217 aaKnown RBP18.83■□□□□ 0.6
COL7A1-206ENST00000466591 MTAPQ13126 283 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 GAREM2Q75VX8 874 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 HS2ST1Q7LGA3 356 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 ADGRF2Q8IZF7 708 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 C1orf127Q8N9H9 656 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 RUBCNQ92622 972 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 CLDN23Q96B33 292 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 FNBP1Q96RU3 617 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 IER2Q9BTL4 223 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 LRRC3Q9BY71 257 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 KIAA1586Q9HCI6 787 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 RAB23Q9ULC3 237 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 PCDHGA2Q9Y5H1 932 aa18.83■□□□□ 0.6
COL7A1-206ENST00000466591 ANK1P16157 1881 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 TSC2P49815 1807 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 NRG2O14511 850 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CSH1P0DML2 217 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CSH2P0DML3 217 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 ACAT1P24752 427 aaKnown RBP18.82■□□□□ 0.6
COL7A1-206ENST00000466591 ID4P47928 161 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 LHX1P48742 406 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CCR3P51677 355 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 NRLP54845 237 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 PLCB2Q00722 1185 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 DUOXA2Q1HG44 320 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 FAM26FQ5R3K3 315 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 LMBRD2Q68DH5 695 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CC2D1AQ6P1N0 951 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-206ENST00000466591 TSSK4Q6SA08 328 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 KIAA2013Q8IYS2 634 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CEP57L1Q8IYX8 460 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 SPRYD3Q8NCJ5 442 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 ZSWIM2Q8NEG5 633 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 BPIFB1Q8TDL5 484 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 HPS3Q969F9 1004 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 BORCS6Q96GS4 357 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 MMS19Q96T76 1030 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 FGFBP2Q9BYJ0 223 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 TRIM9Q9C026 710 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 MAGEF1Q9HAY2 307 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 ZSCAN32Q9NX65 697 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 HSPBP1Q9NZL4 362 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 UXTQ9UBK9 157 aaPredicted RBP18.82■□□□□ 0.6
COL7A1-206ENST00000466591 CFAP45Q9UL16 551 aa18.82■□□□□ 0.6
COL7A1-206ENST00000466591 TICRRQ7Z2Z1 1910 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 POLR2DO15514 142 aaKnown RBP18.81■□□□□ 0.6
COL7A1-206ENST00000466591 ZSCAN22P10073 491 aaPredicted RBP18.81■□□□□ 0.6
COL7A1-206ENST00000466591 DLATP10515 647 aaKnown RBP18.81■□□□□ 0.6
COL7A1-206ENST00000466591 TNNI1P19237 187 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 CYP2J2P51589 502 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 LRRTM3Q86VH5 581 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 SCN4BQ8IWT1 228 aa18.81■□□□□ 0.6
COL7A1-206ENST00000466591 NELFCDQ8IXH7 590 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms