RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 CCT8L1PA6NM43 557 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 GRAP2O75791 330 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 PSMC1P62191 440 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 CDO1Q16878 200 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ATF7IP2Q5U623 682 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 HIBCHQ6NVY1 386 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 SPOCD1Q6ZMY3 1216 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ARMC9Q7Z3E5 817 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 YTHDF3Q7Z739 585 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 CNPY4Q8N129 248 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 RBM41Q96IZ5 413 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 SERPINB12Q96P63 405 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 TGS1Q96RS0 853 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 NIFKQ9BYG3 293 aaKnown RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 ROPN1BQ9BZX4 212 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 ROPN1Q9HAT0 212 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 PDGFCQ9NRA1 345 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ADGRA2Q96PE1 1338 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 LIASO43766 372 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 MAFO75444 373 aaPredicted RBP17.26■□□□□ 0.35
SLX4-202ENST00000466154 ATG7O95352 703 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 MAP3K6O95382 1288 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 CALB1P05937 261 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ATP5DP30049 168 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 GAD2Q05329 585 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 SGSM1Q2NKQ1 1148 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 EFCAB12Q6NXP0 572 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 VSTM1Q6UX27 236 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 METTL7BQ6UX53 244 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 WDR49Q8IV35 697 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ANKRD36BP1Q96IX9 119 aa17.26■□□□□ 0.35
SLX4-202ENST00000466154 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 KRT3P12035 628 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 RCOR2Q8IZ40 523 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 MINDY3Q9H8M7 445 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 PHIPQ8WWQ0 1821 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 C5orf60A6NFR6 353 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 ABCD1P33897 745 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 PDIA2Q13087 525 aaKnown RBP17.25■□□□□ 0.35
SLX4-202ENST00000466154 UBA3Q8TBC4 463 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 CENPTQ96BT3 561 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 METTL5Q9NRN9 209 aaKnown RBP17.25■□□□□ 0.35
SLX4-202ENST00000466154 CD48P09326 243 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 EFNA5P52803 228 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 SYDE1Q6ZW31 735 aaPredicted RBP17.25■□□□□ 0.35
SLX4-202ENST00000466154 SULF1Q8IWU6 871 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 WDTC1Q8N5D0 677 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 LRRN4Q8WUT4 740 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 CCT6BQ92526 530 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 HMGXB4Q9UGU5 601 aa17.25■□□□□ 0.35
SLX4-202ENST00000466154 CST8O60676 142 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 ITGB3P05106 788 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 NFICP08651 508 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 TXNP10599 105 aaKnown RBP17.24■□□□□ 0.35
SLX4-202ENST00000466154 ICAM3P32942 547 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 E2F5Q15329 346 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 TAF5Q15542 800 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 Q3C1V9 767 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 PTPN20Q4JDL3 420 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 TMEM134Q9H6X4 195 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 SMYD3Q9H7B4 428 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 RPF1Q9H9Y2 349 aaKnown RBP17.24■□□□□ 0.35
SLX4-202ENST00000466154 TXNRD2Q9NNW7 524 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 BAIAP2L1Q9UHR4 511 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 AKT3Q9Y243 479 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 WDR91A4D1P6 747 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 SRRM3A6NNA2 597 aaPredicted RBP17.24■□□□□ 0.35
SLX4-202ENST00000466154 TARBP2Q15633 366 aaKnown RBP17.24■□□□□ 0.35
SLX4-202ENST00000466154 IER5Q5VY09 327 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 SLCO2A1Q92959 643 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 TBC1D31Q96DN5 1066 aa17.24■□□□□ 0.35
SLX4-202ENST00000466154 ASCC2Q9H1I8 757 aaPredicted RBP17.24■□□□□ 0.35
SLX4-202ENST00000466154 PIGRP01833 764 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 CAV1Q03135 178 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 KCTD2Q14681 263 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 TFDP3Q5H9I0 405 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 ZNF667Q5HYK9 610 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 TRPM8Q7Z2W7 1104 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 RFX6Q8HWS3 928 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 VCPIP1Q96JH7 1222 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 ACTR5Q9H9F9 607 aaPredicted RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 EFCC1Q9HA90 598 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 GOLGA8RI6L899 631 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 CDH16O75309 829 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 OTUD4Q01804 1114 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 MFSD5Q6N075 450 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 ZPBP2Q6X784 338 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 ZC3H18Q86VM9 953 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 KCTD6Q8NC69 237 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 SPOCK2Q92563 424 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 HEXIM2Q96MH2 286 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 KLF6Q99612 283 aaPredicted RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 GPR20Q99678 358 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 M0QYV0 167 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 VTNP04004 478 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 GDF10P55107 478 aa17.23■□□□□ 0.35
SLX4-202ENST00000466154 BASP1P80723 227 aaKnown RBP17.23■□□□□ 0.35
SLX4-202ENST00000466154 RIOX2Q8IUF8 465 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms