RNA–Protein interactions for RNA: ENST00000465727.5

SDF4-205, Transcript of stromal cell derived factor 4, humanhuman

TSL 2

Gene SDF4, Length 2,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-205ENST00000465727 PGM1P36871 562 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 PIK3CAP42336 1068 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 SERPINB4P48594 390 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 RARRES1P49788 294 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 GPX6P59796 221 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 DLGAP5Q15398 846 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 FAM98CQ17RN3 349 aaKnown RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 PRR5LQ6MZQ0 368 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 SDCCAG8Q86SQ7 713 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 GLIS1Q8NBF1 620 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 ACSS3Q9H6R3 686 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 KCNK13Q9HB14 408 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 ADAMTSL1Q8N6G6 1762 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 ITGAVP06756 1048 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 LYNP07948 512 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 DLDP09622 509 aaKnown RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 ARP10275 920 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 TSHRP16473 764 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 TAL1P17542 331 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 DSG1Q02413 1049 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 THOC5Q13769 683 aaKnown RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 WDR72Q3MJ13 1102 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 CAPN12Q6ZSI9 719 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 NET1Q7Z628 596 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 TMPRSS6Q8IU80 811 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 CCDC110Q8TBZ0 833 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 DTX3LQ8TDB6 740 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 EZH1Q92800 747 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 NKD2Q969F2 451 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 MFSD14AQ96MC6 490 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 PAFAH2Q99487 392 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 EPAS1Q99814 870 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 ASCC2Q9H1I8 757 aaPredicted RBP20.76■□□□□ 0.91
SDF4-205ENST00000465727 C1orf112Q9NSG2 853 aa20.76■□□□□ 0.91
SDF4-205ENST00000465727 WDR91A4D1P6 747 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 ZSCAN5DPP0CG00 497 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 DHRS4L1P0CG22 281 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 GSTT1P30711 240 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 PTPN7P35236 360 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 VCPP55072 806 aaKnown RBP20.75■□□□□ 0.91
SDF4-205ENST00000465727 MAMLD1Q13495 774 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 PRKD1Q15139 912 aaPredicted RBP20.75■□□□□ 0.91
SDF4-205ENST00000465727 SHROOM1Q2M3G4 852 aaPredicted RBP20.75■□□□□ 0.91
SDF4-205ENST00000465727 TRMT5Q32P41 509 aaKnown RBP20.75■□□□□ 0.91
SDF4-205ENST00000465727 C6orf163Q5TEZ5 329 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 PLEKHA7Q6IQ23 1121 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 MIER3Q7Z3K6 550 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 SLITRK1Q96PX8 696 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 PCMTD2Q9NV79 361 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 RGPD3A6NKT7 1758 aaPredicted RBP20.75■□□□□ 0.91
SDF4-205ENST00000465727 RGPD4Q7Z3J3 1758 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 SMCHD1A6NHR9 2005 aa20.75■□□□□ 0.91
SDF4-205ENST00000465727 PLSCR1O15162 318 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 SLURP2P0DP57 97 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 OASLQ15646 514 aaKnown RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 HP1BP3Q5SSJ5 553 aaPredicted RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 SV2AQ7L0J3 742 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 PYROXD1Q8WU10 500 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 MRRFQ96E11 262 aaKnown RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 OXNAD1Q96HP4 312 aaPredicted RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 FBXL18Q96ME1 805 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 FAM210AQ96ND0 272 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 IP6K2Q9UHH9 426 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 CLUHO75153 1309 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 THSD7AQ9UPZ6 1657 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 SMAPO00193 183 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 KLF11O14901 512 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 GLRA2P23416 452 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 SCNN1DP51172 638 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 ARL4CP56559 192 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 ABCB5Q2M3G0 1257 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 LRRC38Q5VT99 294 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 CCNJLQ8IV13 435 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 ZFPM1Q8IX07 1006 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 KBTBD2Q8IY47 623 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 CENPKQ9BS16 269 aa20.74■□□□□ 0.91
SDF4-205ENST00000465727 FBXO6Q9NRD1 293 aaPredicted RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 FARP1Q9Y4F1 1045 aaPredicted RBP20.74■□□□□ 0.91
SDF4-205ENST00000465727 SLX4Q8IY92 1834 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 SLC16A4O15374 487 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 LYPLA2O95372 231 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 CRABP2P29373 138 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 STAT2P52630 851 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 AP2B1P63010 937 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 NOP14P78316 857 aaKnown RBP20.73■□□□□ 0.91
SDF4-205ENST00000465727 NLRX1Q86UT6 975 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 LRRC6Q86X45 466 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 PHF13Q86YI8 300 aaPredicted RBP20.73■□□□□ 0.91
SDF4-205ENST00000465727 MAP4K3Q8IVH8 894 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 B4GALNT2Q8NHY0 566 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 OLFM3Q96PB7 478 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 SENP7Q9BQF6 1050 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 SLC17A7Q9P2U7 560 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 EP400Q96L91 3159 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 FCHO1O14526 889 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 TLR3O15455 904 aaKnown RBP20.73■□□□□ 0.91
SDF4-205ENST00000465727 CIB2O75838 187 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 GJC1P36383 396 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 ECE1P42892 770 aa20.73■□□□□ 0.91
SDF4-205ENST00000465727 TFDP1Q14186 410 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms