RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 CFAP221Q4G0U5 840 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 INTS6LQ5JSJ4 861 aaKnown RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 ATAT1Q5SQI0 421 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 EP400NLQ6ZTU2 488 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 UNC93AQ86WB7 457 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 LEMD2Q8NC56 503 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 CNOT6LQ96LI5 555 aaKnown RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 MMS19Q96T76 1030 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 PRKD2Q9BZL6 878 aa14.67□□□□□ -0.06
LIMD1-203ENST00000465039 DDX43Q9NXZ2 648 aaKnown RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 USP15Q9Y4E8 981 aaPredicted RBP14.67□□□□□ -0.06
LIMD1-203ENST00000465039 DENND4AQ7Z401 1863 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 TULP1O00294 542 aaPredicted RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 PRRG1O14668 218 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 AFPP02771 609 aaKnown RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 ASPAP45381 313 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 TUFMP49411 452 aaKnown RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 RBM10P98175 930 aaKnown RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 MYL5Q02045 173 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 TFF2Q03403 129 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 TYRO3Q06418 890 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 CBWD6Q4V339 395 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 WDR44Q5JSH3 913 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 CBWD3Q5JTY5 395 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 CBWD5Q5RIA9 395 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 PPM1LQ5SGD2 360 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 SLC7A14Q8TBB6 771 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 TNIP3Q96KP6 325 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 FAM81BQ96LP2 452 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 PKMYT1Q99640 499 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 SNX25Q9H3E2 840 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 AVENQ9NQS1 362 aaPredicted RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 PRDM6Q9NQX0 595 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 MAGEC2Q9UBF1 373 aaPredicted RBP14.66□□□□□ -0.06
LIMD1-203ENST00000465039 ASB3Q9Y575 518 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 INSL5Q9Y5Q6 135 aa14.66□□□□□ -0.06
LIMD1-203ENST00000465039 MTMR11A4FU01 709 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 BMP1P13497 986 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 TBXAS1P24557 533 aaPredicted RBP14.65□□□□□ -0.06
LIMD1-203ENST00000465039 GNL1P36915 607 aaPredicted RBP14.65□□□□□ -0.06
LIMD1-203ENST00000465039 MAGEA11P43364 429 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 KCNH2Q12809 1159 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 MAN2A1Q16706 1144 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 FAM171BQ6P995 826 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 C4orf50Q6ZRC1 276 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 IRF2BP1Q8IU81 584 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 GLYCTKQ8IVS8 523 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 JAKMIP2Q96AA8 810 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 ZNF707Q96C28 371 aaPredicted RBP14.65□□□□□ -0.06
LIMD1-203ENST00000465039 NXF1Q9UBU9 619 aaKnown RBP14.65□□□□□ -0.06
LIMD1-203ENST00000465039 USTQ9Y2C2 406 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 NFE2L3Q9Y4A8 694 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 PCDHB5Q9Y5E4 795 aa14.65□□□□□ -0.06
LIMD1-203ENST00000465039 SPTBN5Q9NRC6 3674 aaKnown RBP14.65□□□□□ -0.06
LIMD1-203ENST00000465039 CCDC195A0A1B0GUA6 201 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 LRG1P02750 347 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 YWHAEP62258 255 aaKnown RBP14.64□□□□□ -0.07
LIMD1-203ENST00000465039 ADCY1Q08828 1119 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 RARS2Q5T160 578 aaKnown RBP14.64□□□□□ -0.07
LIMD1-203ENST00000465039 CDKAL1Q5VV42 579 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 SCARA3Q6AZY7 606 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 VSTM1Q6UX27 236 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 RNF19BQ6ZMZ0 732 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 SYT15Q9BQS2 421 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 PHF7Q9BWX1 381 aaPredicted RBP14.64□□□□□ -0.07
LIMD1-203ENST00000465039 CYP4F11Q9HBI6 524 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
LIMD1-203ENST00000465039 ZFP37Q9Y6Q3 630 aaPredicted RBP14.64□□□□□ -0.07
LIMD1-203ENST00000465039 BDP1A6H8Y1 2624 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 CUL9Q8IWT3 2517 aa14.64□□□□□ -0.07
LIMD1-203ENST00000465039 MICAL2O94851 1124 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 FGF19O95750 216 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 KCNQ1P51787 676 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ARPP19P56211 112 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 GCNT1Q02742 428 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 SLC39A12Q504Y0 691 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 TMC5Q6UXY8 1006 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 OSTM1Q86WC4 334 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ADHFE1Q8IWW8 467 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 CRYBG2Q8N1P7 616 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ELMOD1Q8N336 334 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 B3GALNT2Q8NCR0 500 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ANKRD20A12PQ8NF67 263 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 OR6B3Q8NGW1 331 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 MYCBPAPQ8TBZ2 947 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 SMG7Q92540 1137 aaKnown RBP14.63□□□□□ -0.07
LIMD1-203ENST00000465039 SEMA4DQ92854 862 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 MRPL45Q9BRJ2 306 aaKnown RBP14.63□□□□□ -0.07
LIMD1-203ENST00000465039 FUCA2Q9BTY2 467 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ELOVL4Q9GZR5 314 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 SMYD3Q9H7B4 428 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 MMRN2Q9H8L6 949 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 YIPF1Q9Y548 306 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 A0A0C4DFX4 3053 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 ATP8B3O60423 1300 aa14.63□□□□□ -0.07
LIMD1-203ENST00000465039 C2orf16Q68DN1 1984 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 A8MXQ7 604 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 KCNJ18B7U540 433 aa14.62□□□□□ -0.07
LIMD1-203ENST00000465039 CILPO75339 1184 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms