RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 CFAP69A5D8W1 941 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CFBP00751 764 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 ITGAVP06756 1048 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 RARBP10826 455 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CD58P19256 250 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 SCNN1DP51172 638 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 VCPP55072 806 aaKnown RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 GPX6P59796 221 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CYP24A1Q07973 514 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 PDIA2Q13087 525 aaKnown RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 MAMLD1Q13495 774 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 DLGAP5Q15398 846 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 OASLQ15646 514 aaKnown RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 CCDC174Q6PII3 467 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 NIPA1Q7RTP0 329 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 PHF13Q86YI8 300 aaPredicted RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 MAP4K3Q8IVH8 894 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 SP8Q8IXZ3 490 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 GLIS1Q8NBF1 620 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 SMC1BQ8NDV3 1235 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CPA5Q8WXQ8 436 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 NCSTNQ92542 709 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CCDC127Q96BQ5 260 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 GBP5Q96PP8 586 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 SLITRK1Q96PX8 696 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 FAM118BQ9BPY3 351 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 MXRA8Q9BRK3 442 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 MRIQ9BWK5 157 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 TSSK1BQ9BXA7 367 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 TMEM120AQ9BXJ8 343 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 TMX4Q9H1E5 349 aaPredicted RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 RANBP17Q9H2T7 1088 aaKnown RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 ACSS3Q9H6R3 686 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.68□□□□□ -1.183e-10■■■■■ 57.7
USP48-206ENST00000464577 KRT82Q9NSB4 513 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 C1orf112Q9NSG2 853 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 IP6K2Q9UHH9 426 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 DCTN4Q9UJW0 460 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 ZNF148Q9UQR1 794 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 MRPL11Q9Y3B7 192 aaKnown RBP7.68□□□□□ -1.18
USP48-206ENST00000464577 SLC4A7Q9Y6M7 1214 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 CLUHO75153 1309 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 LY75O60449 1722 aa7.68□□□□□ -1.18
USP48-206ENST00000464577 A0A0G2JND7 137 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 DDTLA6NHG4 134 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 SMAPO00193 183 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 KLF11O14901 512 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SLC16A4O15374 487 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 RNF8O76064 485 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 GLRA2P23416 452 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 BRD2P25440 801 aaKnown RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 PSMC4P43686 418 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 CRKP46108 304 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 NEK3P51956 506 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 NOMO3P69849 1222 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 PRKD1Q15139 912 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 HIF1AQ16665 826 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 C15orf39Q6ZRI6 1047 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 RINLQ6ZS11 566 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SV2AQ7L0J3 742 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SH3BP5LQ7L8J4 393 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 NET1Q7Z628 596 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 NLRX1Q86UT6 975 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 DRAXINQ8NBI3 349 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 PHC3Q8NDX5 983 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 TCP10LQ8TDR4 215 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 WDR60Q8WVS4 1066 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 PAFAH2Q99487 392 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 FRMD8P1Q9BZ68 369 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 DEFB129Q9H1M3 183 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 KCNK13Q9HB14 408 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 DMAP1Q9NPF5 467 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 TOPORSQ9NS56 1045 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 TAS2R1Q9NYW7 299 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 IL1RAPL1Q9NZN1 696 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 FAM198AQ9UFP1 575 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 TBX20Q9UMR3 447 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 COL2A1P02458 1487 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 E7ESA3 106 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 KRT1P04264 644 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 ATP5BP06576 529 aaKnown RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 DLDP09622 509 aaKnown RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 ZSCAN5DPP0CG00 497 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SERPINB3P29508 390 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 PIK3CAP42336 1068 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 ECE1P42892 770 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 QARSP47897 775 aaKnown RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 STAT2P52630 851 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SH3BGRP55822 239 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 ARL4CP56559 192 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 ZBTB16Q05516 673 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 CDK18Q07002 472 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 OVGP1Q12889 678 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 TRMT5Q32P41 509 aaKnown RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 WDR72Q3MJ13 1102 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SPOCD1Q6ZMY3 1216 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 SDCCAG8Q86SQ7 713 aaPredicted RBP7.67□□□□□ -1.18
USP48-206ENST00000464577 KBTBD2Q8IY47 623 aa7.67□□□□□ -1.18
USP48-206ENST00000464577 PDCD7Q8N8D1 485 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms