RNA–Protein interactions for RNA: ENST00000463965.1

SURF1-203, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 3

Gene SURF1, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-203ENST00000463965 DUSP4Q13115 394 aa28.03■■■□□ 2.08
SURF1-203ENST00000463965 NFE2Q16621 373 aaPredicted RBP28.03■■■□□ 2.08
SURF1-203ENST00000463965 TCERG1LQ5VWI1 586 aa28.03■■■□□ 2.08
SURF1-203ENST00000463965 LIMS2Q7Z4I7 341 aa28.03■■■□□ 2.08
SURF1-203ENST00000463965 GRASPQ7Z6J2 395 aaPredicted RBP28.03■■■□□ 2.08
SURF1-203ENST00000463965 PLCD3Q8N3E9 789 aa28.03■■■□□ 2.08
SURF1-203ENST00000463965 FEZF2Q8TBJ5 459 aa28.03■■■□□ 2.08
SURF1-203ENST00000463965 TACC1O75410 805 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 HLA-DRAP01903 254 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 WARSP23381 471 aaKnown RBP28.02■■■□□ 2.08
SURF1-203ENST00000463965 ALDH1A3P47895 512 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 TUFMP49411 452 aaKnown RBP28.02■■■□□ 2.08
SURF1-203ENST00000463965 STX17P56962 302 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 MCCD1P59942 119 aaPredicted RBP28.02■■■□□ 2.08
SURF1-203ENST00000463965 PPP3CAQ08209 521 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 CCDC40Q4G0X9 1142 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 DCAF17Q5H9S7 520 aaPredicted RBP28.02■■■□□ 2.08
SURF1-203ENST00000463965 KRT39Q6A163 491 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 IQCEQ6IPM2 695 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 FRMD5Q7Z6J6 570 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 ATAD1Q8NBU5 361 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 SPPL2BQ8TCT7 592 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 GPT2Q8TD30 523 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 DUSP9Q99956 384 aaKnown RBP28.02■■■□□ 2.08
SURF1-203ENST00000463965 TSC2P49815 1807 aa28.02■■■□□ 2.08
SURF1-203ENST00000463965 GNA14O95837 355 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 GNL1P36915 607 aaPredicted RBP28.01■■■□□ 2.07
SURF1-203ENST00000463965 TWF1Q12792 350 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 INTS6LQ5JSJ4 861 aaKnown RBP28.01■■■□□ 2.07
SURF1-203ENST00000463965 OSTM1Q86WC4 334 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 OR6B3Q8NGW1 331 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 ZNF512Q96ME7 567 aaPredicted RBP28.01■■■□□ 2.07
SURF1-203ENST00000463965 CD320Q9NPF0 282 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 DACH1Q9UI36 760 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 RWDD2AQ9UIY3 292 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 CDH9Q9ULB4 789 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 YIPF1Q9Y548 306 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 PCDHB5Q9Y5E4 795 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 C5orf42Q9H799 3197 aa28.01■■■□□ 2.07
SURF1-203ENST00000463965 PTPN2P17706 415 aa28■■■□□ 2.07
SURF1-203ENST00000463965 FSHRP23945 695 aa28■■■□□ 2.07
SURF1-203ENST00000463965 ACAT1P24752 427 aaKnown RBP28■■■□□ 2.07
SURF1-203ENST00000463965 MXI1P50539 228 aa28■■■□□ 2.07
SURF1-203ENST00000463965 EPHB3P54753 998 aa28■■■□□ 2.07
SURF1-203ENST00000463965 LRRTM3Q86VH5 581 aa28■■■□□ 2.07
SURF1-203ENST00000463965 KBTBD7Q8WVZ9 684 aa28■■■□□ 2.07
SURF1-203ENST00000463965 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP28■■■□□ 2.076e-14■□□□□ 10.9
SURF1-203ENST00000463965 SLC27A5Q9Y2P5 690 aa28■■■□□ 2.07
SURF1-203ENST00000463965 C2orf16Q68DN1 1984 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 C2CD4DB7Z1M9 353 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 VNN2O95498 520 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 ASS1P00966 412 aaKnown RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 GBP2P32456 591 aaPredicted RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 MAPRE1Q15691 268 aaKnown RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 MGAT5BQ3V5L5 792 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 PABPC1LQ4VXU2 614 aaKnown RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 SEPT5Q99719 369 aaPredicted RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 SYT15Q9BQS2 421 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 MRPL45Q9BRJ2 306 aaKnown RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 ABI2Q9NYB9 513 aaPredicted RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 DNMT3BQ9UBC3 853 aaKnown RBP27.99■■■□□ 2.07
SURF1-203ENST00000463965 BDP1A6H8Y1 2624 aa27.99■■■□□ 2.07
SURF1-203ENST00000463965 PDGFRBP09619 1106 aa27.98■■■□□ 2.07
SURF1-203ENST00000463965 GET4Q7L5D6 327 aaPredicted RBP27.98■■■□□ 2.07
SURF1-203ENST00000463965 RNF135Q8IUD6 432 aa27.98■■■□□ 2.07
SURF1-203ENST00000463965 ZDHHC14Q8IZN3 488 aa27.98■■■□□ 2.07
SURF1-203ENST00000463965 TAS1R2Q8TE23 839 aa27.98■■■□□ 2.07
SURF1-203ENST00000463965 SRRTQ9BXP5 876 aaKnown RBP27.98■■■□□ 2.07
SURF1-203ENST00000463965 NLRP12P59046 1061 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 CYP4A22Q5TCH4 519 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 SCARA5Q6ZMJ2 495 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 C4orf50Q6ZRC1 276 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 FBXL13Q8NEE6 735 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 CORO1BQ9BR76 489 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 CRISPLD1Q9H336 500 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 HCFC1R1Q9NWW0 138 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 GTF3C4Q9UKN8 822 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 ASB3Q9Y575 518 aa27.97■■■□□ 2.07
SURF1-203ENST00000463965 A8MXQ7 604 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 ZNF197O14709 1029 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 RHOP08100 348 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 CCDC192P0DO97 292 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 LMO2P25791 158 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 NTHL1P78549 312 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 VEPH1Q14D04 833 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 TPD52L1Q16890 204 aaPredicted RBP27.96■■■□□ 2.07
SURF1-203ENST00000463965 ITIH5Q86UX2 942 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 SPATA2LQ8IUW3 424 aaPredicted RBP27.96■■■□□ 2.07
SURF1-203ENST00000463965 LEMD2Q8NC56 503 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 FAM200AQ8TCP9 573 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 SMYD3Q9H7B4 428 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 ABCB6Q9NP58 842 aa27.96■■■□□ 2.07
SURF1-203ENST00000463965 AVENQ9NQS1 362 aaPredicted RBP27.96■■■□□ 2.07
SURF1-203ENST00000463965 MRPS23Q9Y3D9 190 aaKnown RBP27.96■■■□□ 2.07
SURF1-203ENST00000463965 ZFP37Q9Y6Q3 630 aaPredicted RBP27.96■■■□□ 2.07
SURF1-203ENST00000463965 HAPLN1P10915 354 aaPredicted RBP27.95■■■□□ 2.06
SURF1-203ENST00000463965 TRIM21P19474 475 aaKnown RBP27.95■■■□□ 2.06
SURF1-203ENST00000463965 NOP14P78316 857 aaKnown RBP27.95■■■□□ 2.06
SURF1-203ENST00000463965 WDR44Q5JSH3 913 aa27.95■■■□□ 2.06
SURF1-203ENST00000463965 PDZD4Q76G19 769 aaPredicted RBP27.95■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms