RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 SGSM1Q2NKQ1 1148 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 FAM171BQ6P995 826 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 GRASPQ7Z6J2 395 aaPredicted RBP18.96■□□□□ 0.63
VPS52-214ENST00000463486 FRMD5Q7Z6J6 570 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 MLKLQ8NB16 471 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 SEMA4DQ92854 862 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 SLC35C1Q96A29 364 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 SDCBP2Q9H190 292 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 APOBEC3GQ9HC16 384 aaKnown RBP18.96■□□□□ 0.63
VPS52-214ENST00000463486 TMEM8AQ9HCN3 771 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 HCFC1R1Q9NWW0 138 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 CEP72Q9P209 647 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 HSFX1Q9UBD0 423 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 RWDD2AQ9UIY3 292 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 USTQ9Y2C2 406 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 SLC27A5Q9Y2P5 690 aa18.96■□□□□ 0.63
VPS52-214ENST00000463486 R3HCC1Q9Y3T6 440 aaKnown RBP18.96■□□□□ 0.63
VPS52-214ENST00000463486 BICDL2A1A5D9 508 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 C2CD4DB7Z1M9 353 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 TNFRSF10AO00220 468 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 NRG2O14511 850 aaPredicted RBP18.95■□□□□ 0.62
VPS52-214ENST00000463486 PRRG1O14668 218 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 ELF1P32519 619 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 ZNF699Q32M78 642 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 DPCR1Q3MIW9 517 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 INTS6LQ5JSJ4 861 aaKnown RBP18.95■□□□□ 0.62
VPS52-214ENST00000463486 POTEHQ6S545 545 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 TAF4BQ92750 862 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 DNAJC25Q9H1X3 360 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 SMYD3Q9H7B4 428 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 NXF1Q9UBU9 619 aaKnown RBP18.95■□□□□ 0.62
VPS52-214ENST00000463486 YIPF1Q9Y548 306 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 CLUHO75153 1309 aa18.95■□□□□ 0.62
VPS52-214ENST00000463486 MYBPHLA2RUH7 354 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 ATP2C2O75185 946 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 XYLBO75191 536 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 ASPAP45381 313 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 CDH8P55286 799 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 MARSP56192 900 aaKnown RBP18.94■□□□□ 0.62
VPS52-214ENST00000463486 MYL7Q01449 175 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 SMARCB1Q12824 385 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 CBWD6Q4V339 395 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 CBWD3Q5JTY5 395 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 CBWD5Q5RIA9 395 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 KRT39Q6A163 491 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 SPOPLQ6IQ16 392 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 IRF2BP1Q8IU81 584 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 MMS19Q96T76 1030 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 PI4K2AQ9BTU6 479 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 LRRC3Q9BY71 257 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 PIDD1Q9HB75 910 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 CRTAC1Q9NQ79 661 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 AVENQ9NQS1 362 aaPredicted RBP18.94■□□□□ 0.62
VPS52-214ENST00000463486 ARMCX3Q9UH62 379 aaPredicted RBP18.94■□□□□ 0.62
VPS52-214ENST00000463486 GTF3C4Q9UKN8 822 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 COQ4Q9Y3A0 265 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 DOCK8Q8NF50 2099 aa18.94■□□□□ 0.62
VPS52-214ENST00000463486 SOAT2O75908 522 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 SP100P23497 879 aaPredicted RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 GNL1P36915 607 aaPredicted RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 NLRP12P59046 1061 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 TWF1Q12792 350 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 ZNF667Q5HYK9 610 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 RNF135Q8IUD6 432 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 TRIM59Q8IWR1 403 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 DCP1BQ8IZD4 617 aaKnown RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 ZDHHC14Q8IZN3 488 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 C2orf15Q8WU43 125 aaKnown RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 MYADMQ96S97 322 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 LPIN3Q9BQK8 851 aa18.93■□□□□ 0.62
VPS52-214ENST00000463486 SRRTQ9BXP5 876 aaKnown RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 METTL14Q9HCE5 456 aaKnown RBP18.93■□□□□ 0.62
VPS52-214ENST00000463486 PDGFRBP09619 1106 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 HAPLN1P10915 354 aaPredicted RBP18.92■□□□□ 0.62
VPS52-214ENST00000463486 ATF6P18850 670 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 PCSK1P29120 753 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 SSTR3P32745 418 aaPredicted RBP18.92■□□□□ 0.62
VPS52-214ENST00000463486 RAP1GAPP47736 663 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 MXI1P50539 228 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 EPHA5P54756 1037 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 TNNC1P63316 161 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 TSPY1Q01534 308 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 SLC5A9Q2M3M2 681 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 ITFG1Q8TB96 612 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 SPPL2BQ8TCT7 592 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 SYT15Q9BQS2 421 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 BCO2Q9BYV7 579 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 MMRN2Q9H8L6 949 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 CDH9Q9ULB4 789 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 NR2E1Q9Y466 385 aa18.92■□□□□ 0.62
VPS52-214ENST00000463486 PMM2O15305 246 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 STX10O60499 249 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 MOSPD3O75425 235 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 MBD3O95983 291 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 LRG1P02750 347 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 RHOP08100 348 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 PTPN2P17706 415 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 CCR2P41597 374 aa18.91■□□□□ 0.62
VPS52-214ENST00000463486 PIK3CAP42336 1068 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms