RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 FAM200AQ8TCP9 573 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 PARD3BQ8TEW8 1205 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 MMS19Q96T76 1030 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 DNAJC25Q9H1X3 360 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 KCNH6Q9H252 994 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 RMND1Q9NWS8 449 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 ABI2Q9NYB9 513 aaPredicted RBP17.42■□□□□ 0.38
COL1A1-202ENST00000463440 WNT16Q9UBV4 365 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 HOOK1Q9UJC3 728 aaKnown RBP17.42■□□□□ 0.38
COL1A1-202ENST00000463440 MAPK8IP1Q9UQF2 711 aa17.42■□□□□ 0.38
COL1A1-202ENST00000463440 GABRDO14764 452 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 SOAT2O75908 522 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 FGF19O95750 216 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 CST3P01034 146 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 PDGFBP01127 241 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 CFHP08603 1231 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 HAPLN1P10915 354 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 ACAT1P24752 427 aaKnown RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 CCR2P41597 374 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 BIRC3Q13489 604 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 PNOCQ13519 176 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 INTS6LQ5JSJ4 861 aaKnown RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 CEP135Q66GS9 1140 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 LIMS2Q7Z4I7 341 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 ZNF516Q92618 1163 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 PSMG2Q969U7 264 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 TIGD1Q96MW7 591 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 RPP25Q9BUL9 199 aaKnown RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
COL1A1-202ENST00000463440 SLC2A4RGQ9NR83 387 aa17.41■□□□□ 0.38
COL1A1-202ENST00000463440 LRRIQ3A6PVS8 624 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-202ENST00000463440 ECI2O75521 394 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 SMC2O95347 1197 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 RPL13P26373 211 aaKnown RBP17.4■□□□□ 0.38
COL1A1-202ENST00000463440 ATICP31939 592 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 CASP4P49662 377 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 CDR1P51861 262 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 TNNC1P63316 161 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 TAF12Q16514 161 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 NFIL3Q16649 462 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 DNAJB7Q7Z6W7 309 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-202ENST00000463440 OSTM1Q86WC4 334 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 SIX5Q8N196 739 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 PLEKHO2Q8TD55 490 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 TMC2Q8TDI7 906 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 SYAP1Q96A49 352 aaPredicted RBP17.4■□□□□ 0.38
COL1A1-202ENST00000463440 GSDMAQ96QA5 445 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 KXD1Q9BQD3 176 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 LRRC3Q9BY71 257 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 GPR88Q9GZN0 384 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 TMLHEQ9NVH6 421 aa17.4■□□□□ 0.38
COL1A1-202ENST00000463440 ZDBF2Q9HCK1 2354 aa17.39■□□□□ 0.38
COL1A1-202ENST00000463440 ZNF318Q5VUA4 2279 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 MAPK13O15264 365 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 MOSPD3O75425 235 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 STAU1O95793 577 aaKnown RBP17.39■□□□□ 0.37
COL1A1-202ENST00000463440 FAM163BP0C2L3 166 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 GJA1P17302 382 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 WARSP23381 471 aaKnown RBP17.39■□□□□ 0.37
COL1A1-202ENST00000463440 NR2F2P24468 414 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 AVPR2P30518 371 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 MYL6P60660 151 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 CLDN10P78369 228 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 WDR72Q3MJ13 1102 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 TMC8Q8IU68 726 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 SHKBP1Q8TBC3 707 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 GPR152Q8TDT2 470 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 KBTBD7Q8WVZ9 684 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 ELSPBP1Q96BH3 223 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 PRRX2Q99811 253 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 LPIN3Q9BQK8 851 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 PI4K2AQ9BTU6 479 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 GTPBP4Q9BZE4 634 aaKnown RBP17.39■□□□□ 0.37
COL1A1-202ENST00000463440 SNX25Q9H3E2 840 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 SLITRK6Q9H5Y7 841 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 ZFP14Q9HCL3 533 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 ABCB6Q9NP58 842 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 GTF3C4Q9UKN8 822 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 CDH9Q9ULB4 789 aa17.39■□□□□ 0.37
COL1A1-202ENST00000463440 A0A1W2PRU2 124 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 CLSTN1O94985 981 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 ATF6P18850 670 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 RFX1P22670 979 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 VCPP55072 806 aaKnown RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 RPL10AP62906 217 aaKnown RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 GPC5P78333 572 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 TEAD2Q15562 447 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 MAPRE1Q15691 268 aaKnown RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 ARHGAP15Q53QZ3 475 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 FAM78AQ5JUQ0 283 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 TDRD10Q5VZ19 366 aaKnown RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 ASTLQ6HA08 431 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 SPATA2LQ8IUW3 424 aaPredicted RBP17.38■□□□□ 0.37
COL1A1-202ENST00000463440 FLCNQ8NFG4 579 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 GIPC2Q8TF65 315 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 SMARCD2Q92925 531 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 SMARCE1Q969G3 411 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 ASB16Q96NS5 453 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 PKMYT1Q99640 499 aa17.38■□□□□ 0.37
COL1A1-202ENST00000463440 SYT15Q9BQS2 421 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms