RNA–Protein interactions for RNA: ENST00000463020.1

SND1-203, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 793 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-203ENST00000463020 ZNF806P0C7X5 589 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 PLA2G4BP0C869 781 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 WEE1P30291 646 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 MCM2P49736 904 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 CCDC142Q17RM4 750 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 MGAT5BQ3V5L5 792 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 TMEM119Q4V9L6 283 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 SDHAF4Q5VUM1 108 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 IL31Q6EBC2 164 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 C1orf228Q6PIY5 440 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 HAUS6Q7Z4H7 955 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 USP13Q92995 863 aaPredicted RBP16.99■□□□□ 0.31
SND1-203ENST00000463020 FAM212AQ96EL1 285 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 FAM84AQ96KN4 292 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 HHIPQ96QV1 700 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 REEP2Q9BRK0 252 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 CPSF3Q9UKF6 684 aaKnown RBP16.99■□□□□ 0.31
SND1-203ENST00000463020 ANGPTL2Q9UKU9 493 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 ATG2BQ96BY7 2078 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 ZFYVE26Q68DK2 2539 aa16.99■□□□□ 0.31
SND1-203ENST00000463020 MYH11P35749 1972 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 A0A0B4J269 797 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 ANO9A1A5B4 782 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 ANKRD63C9JTQ0 380 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 GIPC1O14908 333 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 RNF40O75150 1001 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 CYP11A1P05108 521 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 ODC1P11926 461 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 HMGA1P17096 107 aaKnown RBP16.98■□□□□ 0.31
SND1-203ENST00000463020 PRPHP41219 470 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 DTHD1Q6ZMT9 781 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 CACNA2D4Q7Z3S7 1137 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 CMTM8Q8IZV2 173 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 SYNPOQ8N3V7 929 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 FIZ1Q96SL8 496 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
SND1-203ENST00000463020 TBX20Q9UMR3 447 aa16.98■□□□□ 0.31
SND1-203ENST00000463020 SPAG17Q6Q759 2223 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 OBSL1O75147 1896 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 HNRNPDLO14979 420 aaKnown RBP16.97■□□□□ 0.31
SND1-203ENST00000463020 OGTO15294 1046 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 TADA3O75528 432 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 PIGRP01833 764 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 F11P03951 625 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 MPLP40238 635 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 LIG4P49917 911 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 SMTNP53814 917 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 WNT7BP56706 349 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 ATP2C1P98194 919 aaPredicted RBP16.97■□□□□ 0.31
SND1-203ENST00000463020 RUNX3Q13761 415 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 WSCD1Q658N2 575 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 TXNDC8Q6A555 127 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 ARMCX5Q6P1M9 558 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 MAB21L3Q8N8X9 362 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 C12orf50Q8NA57 414 aaPredicted RBP16.97■□□□□ 0.31
SND1-203ENST00000463020 KIF2CQ99661 725 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 RAB34Q9BZG1 259 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 DUSP15Q9H1R2 295 aaPredicted RBP16.97■□□□□ 0.31
SND1-203ENST00000463020 RPF1Q9H9Y2 349 aaKnown RBP16.97■□□□□ 0.31
SND1-203ENST00000463020 STK24Q9Y6E0 443 aa16.97■□□□□ 0.31
SND1-203ENST00000463020 VWA3AA6NCI4 1184 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 TRDMT1O14717 391 aaKnown RBP16.96■□□□□ 0.31
SND1-203ENST00000463020 KCNK5O95279 499 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 CCDC192P0DO97 292 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 HAPLN1P10915 354 aaPredicted RBP16.96■□□□□ 0.31
SND1-203ENST00000463020 ACOT2P49753 483 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 NLRP12P59046 1061 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 SHC2P98077 582 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 PLCB2Q00722 1185 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 PLK5Q496M5 336 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 ITIH5Q86UX2 942 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 LOXL4Q96JB6 756 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 SLC22A12Q96S37 553 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 MSTO1Q9BUK6 570 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 ABI2Q9NYB9 513 aaPredicted RBP16.96■□□□□ 0.31
SND1-203ENST00000463020 HSFX1Q9UBD0 423 aa16.96■□□□□ 0.31
SND1-203ENST00000463020 K7ENM7 598 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 LAD1O00515 517 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 HCRTO43612 131 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 FGF19O95750 216 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 TOP3BO95985 862 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 SPINK2P20155 84 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 CDC25CP30307 473 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 GALK1P51570 392 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 HMGN5P82970 282 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 DHX8Q14562 1220 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 TMEM132DQ14C87 1099 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 ZC2HC1CQ53FD0 456 aaPredicted RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 PSAPL1Q6NUJ1 521 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 EFCAB13Q8IY85 973 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 FAM184AQ8NB25 1140 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 ZSWIM2Q8NEG5 633 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 KCNN1Q92952 543 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 ZC3H10Q96K80 434 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 LSM14BQ9BX40 385 aaKnown RBP16.95■□□□□ 0.3
SND1-203ENST00000463020 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
SND1-203ENST00000463020 SLC8A2Q9UPR5 921 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms