RNA–Protein interactions for RNA: ENST00000462968.2

CD46-210, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 473 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-210ENST00000462968 OR6J1Q8NGC5 347 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 RASGRP4Q8TDF6 673 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 CACTINQ8WUQ7 758 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 APBB2Q92870 758 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 CLIC6Q96NY7 704 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 SLF1Q9BQI6 1058 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 APOL5Q9BWW9 433 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 POMKQ9H5K3 350 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 RAVER2Q9HCJ3 691 aaKnown RBP3.4□□□□□ -1.87
CD46-210ENST00000462968 CYP26B1Q9NR63 512 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 RXFP3Q9NSD7 469 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 ZSCAN32Q9NX65 697 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 MARCH2Q9P0N8 246 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 WHRNQ9P202 907 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 WASF3Q9UPY6 502 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 ZDHHC9Q9Y397 364 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 DMRT1Q9Y5R6 373 aa3.4□□□□□ -1.87
CD46-210ENST00000462968 SMCHD1A6NHR9 2005 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 ZFYVE26Q68DK2 2539 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 CDK5RAP2Q96SN8 1893 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 VAMP4O75379 141 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 DGKIO75912 1065 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 THBDP07204 575 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 RETP07949 1114 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 C1SP09871 688 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 COMTP21964 271 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 LIMK1P53667 647 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 DYNLL1P63167 89 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 CSTF1Q05048 431 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 UBE3AQ05086 875 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 PPP2R5BQ15173 497 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 DPY19L1Q2PZI1 675 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 ATAT1Q5SQI0 421 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 LARP1BQ659C4 914 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 LAIR1Q6GTX8 287 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 XRRA1Q6P2D8 792 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 Q6ZSN1 163 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 MILR1Q7Z6M3 343 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 ADGRA1Q86SQ6 560 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 LRRC47Q8N1G4 583 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 NUDT10Q8NFP7 164 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 MORC4Q8TE76 937 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 LARP4BQ92615 738 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 NELL1Q92832 810 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 CASP10Q92851 521 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 MAP4K1Q92918 833 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 TSR2Q969E8 191 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 ZNF689Q96CS4 500 aaPredicted RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 NUDT11Q96G61 164 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 LMF1Q96S06 567 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 ACAD9Q9H845 621 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 KANSL2Q9H9L4 492 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 TBC1D17Q9HA65 648 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 SLC38A10Q9HBR0 1119 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 A1CFQ9NQ94 594 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 SEMA4GQ9NTN9 838 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 RAB23Q9ULC3 237 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 SMG1Q96Q15 3661 aaKnown RBP3.39□□□□□ -1.87
CD46-210ENST00000462968 OTOGLQ3ZCN5 2332 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 SPTBN2O15020 2390 aa3.39□□□□□ -1.87
CD46-210ENST00000462968 SIP14410 1827 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 LOC102724159A0A0B4J2E5 919 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 KRTAP29-1A8MX34 341 aaPredicted RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 SORBS3O60504 671 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 KCNK5O95279 499 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 UQCRFS1P1P0C7P4 283 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 EEF2P13639 858 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 GLULP15104 373 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 CASTP20810 708 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 THPOP40225 353 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 KRTAP10-11P60412 298 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 COL10A1Q03692 680 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 WDR43Q15061 677 aaKnown RBP eCLIP3.38□□□□□ -1.87
CD46-210ENST00000462968 TCEAL1Q15170 157 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 NONOQ15233 471 aaKnown RBP eCLIP3.38□□□□□ -1.87
CD46-210ENST00000462968 PWP2Q15269 919 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 TKFCQ3LXA3 575 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 GORABQ5T7V8 394 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 OTOP3Q7RTS5 596 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 MRGPRGQ86SM5 289 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 TEX2Q8IWB9 1127 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 CMTR2Q8IYT2 770 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 CELF5Q8N6W0 485 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 ADCY4Q8NFM4 1077 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 IL17DQ8TAD2 202 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 AFG1LQ8WV93 481 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 KAT2BQ92831 832 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 CCDC17Q96LX7 622 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 NEUROD6Q96NK8 337 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 BBC3Q96PG8 261 aaPredicted RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 TMEM209Q96SK2 561 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 TM9SF2Q99805 663 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 KATNAL1Q9BW62 490 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 FAM126AQ9BYI3 521 aaPredicted RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 KLHL25Q9H0H3 589 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 HOMER2Q9NSB8 354 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 IGSF9Q9P2J2 1179 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 HDAC6Q9UBN7 1215 aa3.38□□□□□ -1.87
CD46-210ENST00000462968 ADD3Q9UEY8 706 aaKnown RBP3.38□□□□□ -1.87
CD46-210ENST00000462968 SWAP70Q9UH65 585 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms