RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 SPAG7O75391 227 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 UBOX5O94941 541 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 GSTA1P08263 222 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 CD19P15391 556 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 MCL1Q07820 350 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 PIGHQ14442 188 aaPredicted RBP17.87■□□□□ 0.45
ACTB-207ENST00000462494 MAPK6Q16659 721 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 SMTNL2Q2TAL5 461 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 SWT1Q5T5J6 900 aaKnown RBP17.87■□□□□ 0.45
ACTB-207ENST00000462494 CEP128Q6ZU80 1094 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 ZBTB8OSQ8IWT0 167 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 CCDC63Q8NA47 563 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 ZWILCHQ9H900 591 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 VPS37BQ9H9H4 285 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 SAE1Q9UBE0 346 aaPredicted RBP17.87■□□□□ 0.45
ACTB-207ENST00000462494 AGTPBP1Q9UPW5 1226 aa17.87■□□□□ 0.45
ACTB-207ENST00000462494 GOLGA8MH3BSY2 632 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 HGSO14964 777 aaPredicted RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 KRT19P08727 400 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 RDXP35241 583 aaKnown RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 LACTBP83111 547 aaPredicted RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 TMEM63BQ5T3F8 832 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 LRRC38Q5VT99 294 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 POTEAQ6S8J7 498 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 LBX2Q6XYB7 198 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 SPATA21Q7Z572 469 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 TBC1D1Q86TI0 1168 aaPredicted RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 RHPN2Q8IUC4 686 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 FOXP3Q9BZS1 431 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 PSMA2P25787 234 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 CDKN2BP42772 138 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 RAP1GAPP47736 663 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 VCPP55072 806 aaKnown RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 COPS2P61201 443 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 KCNT1Q5JUK3 1230 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 IER5Q5VY09 327 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 DENND1BQ6P3S1 775 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 DRICH1Q6PGQ1 229 aaPredicted RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 DLK2Q6UY11 383 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 ZBED8Q8IZ13 594 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 CNKSR2Q8WXI2 1034 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 ZNF518BQ9C0D4 1074 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 C10orf88Q9H8K7 445 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 DDX56Q9NY93 547 aaKnown RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 CPSF3Q9UKF6 684 aaKnown RBP17.86■□□□□ 0.45
ACTB-207ENST00000462494 POLIQ9UNA4 740 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 AGAP1Q9UPQ3 857 aa17.86■□□□□ 0.45
ACTB-207ENST00000462494 GJB1P08034 283 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 ABHD2P08910 425 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 EIF4BP23588 611 aaKnown RBP17.85■□□□□ 0.45
ACTB-207ENST00000462494 RFC1P35251 1148 aaPredicted RBP17.85■□□□□ 0.45
ACTB-207ENST00000462494 ELF3P78545 371 aaPredicted RBP17.85■□□□□ 0.45
ACTB-207ENST00000462494 GRM1Q13255 1194 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 ORC1Q13415 861 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 WDR72Q3MJ13 1102 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 PPP1R15BQ5SWA1 713 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 METTL7BQ6UX53 244 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 PPP1R21Q6ZMI0 780 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 MAGEB18Q96M61 343 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 NLRP4Q96MN2 994 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 ADAM33Q9BZ11 813 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 TJP2Q9UDY2 1190 aa17.85■□□□□ 0.45
ACTB-207ENST00000462494 FAM47DPA6NHR8 397 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 NOP56O00567 594 aaKnown RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 TNNC2P02585 160 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 HOXC6P09630 235 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 KRT15P19012 456 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 GCAP28676 217 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 ASPAP45381 313 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 TAP1Q03518 808 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 OASLQ15646 514 aaKnown RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 TAB3Q8N5C8 712 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 CEP120Q8N960 986 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 MAML1Q92585 1016 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 TTC25Q96NG3 672 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 MAF1Q9H063 256 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 EURLQ9NYK6 297 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 DRG1Q9Y295 367 aaKnown RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 ARL2BPQ9Y2Y0 163 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 INO80B-WBP1J3KQ70 363 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 BANF1O75531 89 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 KRT3P12035 628 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 IBSPP21815 317 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 IL9RQ01113 521 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 PDIA2Q13087 525 aaKnown RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 VGLL4Q14135 290 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 MXD4Q14582 209 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 MORF4L2Q15014 288 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 HSDL1Q3SXM5 330 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 SH3D19Q5HYK7 790 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 NOL9Q5SY16 702 aaKnown RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 CDCA2Q69YH5 1023 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 GADL1Q6ZQY3 521 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 FAM47EQ6ZV65 393 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 PNMA8AQ86V59 439 aaPredicted RBP17.84■□□□□ 0.45
ACTB-207ENST00000462494 CEP57Q86XR8 500 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 RIOX2Q8IUF8 465 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 ANKMY2Q8IV38 441 aa17.84■□□□□ 0.45
ACTB-207ENST00000462494 TMEM130Q8N3G9 435 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms