RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 WHRNQ9P202 907 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 CPSF3Q9UKF6 684 aaKnown RBP13.21□□□□□ -0.29
COL4A6-204ENST00000461897 TNFSF13BQ9Y275 285 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 Q9Y3F1 56 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 CASP8AP2Q9UKL3 1982 aa13.21□□□□□ -0.29
COL4A6-204ENST00000461897 RRN3P2A6NIE6 340 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 FSCN2O14926 492 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 SGPL1O95470 568 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 VNN1O95497 513 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 RARAP10276 462 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 CYBAP13498 195 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 AKR1A1P14550 325 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 MFSD10Q14728 455 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 CEP120Q8N960 986 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 ZNF564Q8TBZ8 553 aaPredicted RBP13.21□□□□□ -0.3
COL4A6-204ENST00000461897 CDT1Q9H211 546 aa13.21□□□□□ -0.3
COL4A6-204ENST00000461897 GEMIN8Q9NWZ8 242 aaKnown RBP13.21□□□□□ -0.3
COL4A6-204ENST00000461897 NRCAMQ92823 1304 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 MBLAC1A4D2B0 266 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-204ENST00000461897 ZC3H11AO75152 810 aaKnown RBP eCLIP13.2□□□□□ -0.3
COL4A6-204ENST00000461897 HLA-DRAP01903 254 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 FLT3LGP49771 235 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 MFAP3P55082 362 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 RWDD2BP57060 319 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 ADAM17P78536 824 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 CDR2Q01850 454 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 AUHQ13825 339 aaKnown RBP13.2□□□□□ -0.3
COL4A6-204ENST00000461897 MESDQ14696 234 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 WLSQ5T9L3 541 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 SCARA3Q6AZY7 606 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 CYB5D1Q6P9G0 228 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 RHBDF2Q6PJF5 856 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 SYDE1Q6ZW31 735 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-204ENST00000461897 NLRP7Q8WX94 980 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 CAPNS2Q96L46 248 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 NUP85Q9BW27 656 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 AP5M1Q9H0R1 490 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 SLC12A4Q9UP95 1085 aa13.2□□□□□ -0.3
COL4A6-204ENST00000461897 TRIP12Q14669 1992 aaPredicted RBP13.2□□□□□ -0.3
COL4A6-204ENST00000461897 MYADML2A6NDP7 307 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 GPR25O00155 361 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 RASGRF2O14827 1237 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TP73O15350 636 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 MYL3P08590 195 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PIK3CAP42336 1068 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PSEN2P49810 448 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 IFI35P80217 286 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 GCNT1Q02742 428 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PRKCZQ05513 592 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 FSCN1Q16658 493 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 KCTD19Q17RG1 926 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TMEM132AQ24JP5 1023 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TAOK1Q7L7X3 1001 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 WDR49Q8IV35 697 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 THNSL1Q8IYQ7 743 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 ANKS4BQ8N8V4 417 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 DDX1Q92499 740 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PLVAPQ9BX97 442 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PDZD7Q9H5P4 517 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 INTS9Q9NV88 658 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 MGRN1O60291 552 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TSPAN1O60635 241 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 DUSP11O75319 330 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TCEA3O75764 348 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 ECEL1O95672 775 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 CYP11B1P15538 503 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 ARF4P18085 180 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 MAN1A1P33908 653 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 OSTNP61366 133 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PURAQ00577 322 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 CNGA2Q16280 664 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 DEFB115Q30KQ5 88 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PREPLQ4J6C6 727 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 SPOPLQ6IQ16 392 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 ZNF410Q86VK4 478 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 TMEM192Q8IY95 271 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 DHX38Q92620 1227 aaKnown RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 CPB2Q96IY4 423 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 SERPINB12Q96P63 405 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 FAM49AQ9H0Q0 323 aaPredicted RBP13.19□□□□□ -0.3
COL4A6-204ENST00000461897 ADAMTS10Q9H324 1103 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 AAASQ9NRG9 546 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 C1orf112Q9NSG2 853 aa13.19□□□□□ -0.3
COL4A6-204ENST00000461897 CEP350Q5VT06 3117 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SMIM35A0A1B0GVV1 85 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 TCRBV7S2A1N4TA0A589 114 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 TMEM110-MUSTN1A8MSY1 372 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 CYP26A1O43174 497 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SPOPO43791 374 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 OAS1P00973 400 aaKnown RBP13.18□□□□□ -0.3
COL4A6-204ENST00000461897 TMEM62Q0P6H9 643 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 TRIM32Q13049 653 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SNCBQ16143 134 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 KIZQ2M2Z5 673 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 CCDC105Q8IYK2 499 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 LRRC34Q8IZ02 419 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 MAIP1Q8WWC4 291 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms