RNA–Protein interactions for RNA: ENST00000461710.5

CDK5RAP1-207, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 2

Gene CDK5RAP1, Length 2,650 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-207ENST00000461710 PRR11Q96HE9 360 aaPredicted RBP12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 NSL1Q96IY1 281 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 VCPIP1Q96JH7 1222 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TRIM55Q9BYV6 548 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 VPS11Q9H270 941 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MANSC1Q9H8J5 431 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DBNDD1Q9H9R9 158 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 AGO4Q9HCK5 861 aaKnown RBP12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ETAA1Q9NY74 926 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 WDR35Q9P2L0 1181 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SLC17A7Q9P2U7 560 aa12.12□□□□□ -0.47
CDK5RAP1-207ENST00000461710 POLRMTO00411 1230 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ATP9AO75110 1047 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SSTR1P30872 391 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 VCPP55072 806 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TFDP1Q14186 410 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 HIF1AQ16665 826 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PLA2G4FQ68DD2 849 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 LDHDQ86WU2 507 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PHF13Q86YI8 300 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 BANPQ8N9N5 519 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZNF516Q92618 1163 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PAFAH2Q99487 392 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MMADHCQ9H3L0 296 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KCNK13Q9HB14 408 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PCDH9Q9HC56 1237 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FBXO6Q9NRD1 293 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 METTL5Q9NRN9 209 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 COL20A1Q9P218 1284 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 STX18Q9P2W9 335 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SCOCQ9UIL1 159 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TMX2Q9Y320 296 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FARP1Q9Y4F1 1045 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SCINQ9Y6U3 715 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ANKRD31Q8N7Z5 1873 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MYH9P35579 1960 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GOLGA8SH3BPF8 625 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GOLGA8MH3BSY2 632 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PIAS1O75925 651 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KRT1P04264 644 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SERPINB3P29508 390 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GCLCP48506 637 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 HSD17B4P51659 736 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GAD2Q05329 585 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DMP1Q13316 513 aaPredicted RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SEPT7Q16181 437 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FOXB2Q5VYV0 432 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TRIM72Q6ZMU5 477 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 RINLQ6ZS11 566 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 LRRC6Q86X45 466 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 C4orf19Q8IY42 314 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ABRAQ8N0Z2 381 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GPD1LQ8N335 351 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 FEZF2Q8TBJ5 459 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SENP7Q9BQF6 1050 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TMEM121Q9BTD3 319 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TSSK1BQ9BXA7 367 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SYNCQ9H7C4 482 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TAS2R1Q9NYW7 299 aa12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CPSF2Q9P2I0 782 aaKnown RBP12.11□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SCN9AQ15858 1988 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GOLGA8RI6L899 631 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ITGAVP06756 1048 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ACO1P21399 889 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ARFIP2P53365 341 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 RPL7AP62424 266 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CDK16Q00536 496 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MCL1Q07820 350 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 VPS72Q15906 364 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TKFCQ3LXA3 575 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 SPOCD1Q6ZMY3 1216 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 NIPA1Q7RTP0 329 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZC3H18Q86VM9 953 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 EGFL6Q8IUX8 553 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 CHURC1Q8WUH1 139 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 BSNDQ8WZ55 320 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 NKD2Q969F2 451 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 LBHD1Q9BQE6 289 aaPredicted RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 TMEM120AQ9BXJ8 343 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DEFB129Q9H1M3 183 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ACSS3Q9H6R3 686 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 IP6K2Q9UHH9 426 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 IVNS1ABPQ9Y6Y0 642 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 IFNB1P01574 187 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 GSTA2P09210 222 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 DLDP09622 509 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 PHBP35232 272 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 C1QBPQ07021 282 aaKnown RBP12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ENPEPQ07075 957 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZNF252P-AS1Q0IIN9 211 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 AP1B1Q10567 949 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 KRT72Q14CN4 511 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 XKR9Q5GH70 373 aa12.1□□□□□ -0.47
CDK5RAP1-207ENST00000461710 ZFYVE27Q5T4F4 411 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms