RNA–Protein interactions for RNA: ENST00000461654.1

TMEM39A-203, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-203ENST00000461654 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 EIF3CLB5ME19 914 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 PNMA6AP0CW24 399 aaPredicted RBP16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 LRPAP1P30533 357 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 RPL9P32969 192 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 PDE6CP51160 858 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 SCNN1GP51170 649 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 KIF11P52732 1056 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 ERVFC1P60507 584 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 KRT17Q04695 432 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 PTK2Q05397 1052 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 MTF1Q14872 753 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 CXorf38Q8TB03 319 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 MMS19Q96T76 1030 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 EIF3CQ99613 913 aaKnown RBP16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 ARID3AQ99856 593 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 SPG21Q9NZD8 308 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 PRKAG3Q9UGI9 489 aa16.21■□□□□ 0.19
TMEM39A-203ENST00000461654 ATG2AQ2TAZ0 1938 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 PIRO00625 290 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 CYP26A1O43174 497 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 PLEKP08567 350 aaPredicted RBP16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 IL9P15248 144 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 CD58P19256 250 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 TNFAIP3P21580 790 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 PAX3P23760 479 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 GTF2F1P35269 517 aaKnown RBP eCLIP16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 TAF6P49848 677 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 DLX2Q07687 328 aaPredicted RBP16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 TMEM270Q6UE05 265 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 SCARA5Q6ZMJ2 495 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 TOGARAM2Q6ZUX3 1019 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 ADGRD2Q7Z7M1 963 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 SLC39A11Q8N1S5 342 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 MICAL1Q8TDZ2 1067 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 MSLNLQ96KJ4 702 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 UROC1Q96N76 676 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 IGFLR1Q9H665 355 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 NGRNQ9NPE2 291 aaKnown RBP16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 CISHQ9NSE2 258 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 POLIQ9UNA4 740 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 PPP2R2CQ9Y2T4 447 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 ANK1P16157 1881 aa16.2■□□□□ 0.18
TMEM39A-203ENST00000461654 CITO14578 2027 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 MUC3AQ02505 3323 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 INPPL1O15357 1258 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 TBX10O75333 385 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 POMCP01189 267 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 WEE2P0C1S8 567 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 ACO1P21399 889 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 ASPAP45381 313 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 ALDH7A1P49419 539 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 RNASELQ05823 741 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 TUSC3Q13454 348 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 BMS1Q14692 1282 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 DUSP6Q16828 381 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 NOMO2Q5JPE7 1267 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 TMEM184AQ6ZMB5 413 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 EP400NLQ6ZTU2 488 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 KIAA1328Q86T90 577 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 CCAR2Q8N163 923 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 RBBP8NLQ8NC74 664 aaPredicted RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 GSTCDQ8NEC7 633 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 FAM193BQ96PV7 902 aaPredicted RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 AGPAT1Q99943 283 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 DESI2Q9BSY9 194 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 BCO2Q9BYV7 579 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 PDCL3Q9H2J4 239 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 TLE6Q9H808 572 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 CD320Q9NPF0 282 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 KCND1Q9NSA2 647 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 SEPT11Q9NVA2 429 aaKnown RBP16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 SNX9Q9Y5X1 595 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 ADGRG1Q9Y653 693 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 BRWD1Q9NSI6 2320 aa16.19■□□□□ 0.18
TMEM39A-203ENST00000461654 PLXNA4Q9HCM2 1894 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 KPNA7A9QM74 516 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 LINC01565O15544 149 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 MBTPS2O43462 519 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 HUS1O60921 280 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 CYP11B1P15538 503 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 CLCN1P35523 988 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 NRIP1P48552 1158 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 BCAR1P56945 870 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 SOX4Q06945 474 aaPredicted RBP16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 KCNC3Q14003 757 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 SMAD2Q15796 467 aaKnown RBP16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 SLC18A3Q16572 532 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 C10orf76Q5T2E6 689 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 SCARA3Q6AZY7 606 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 ZNF571Q7Z3V5 609 aaPredicted RBP16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 ZNF677Q86XU0 584 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 GJD3Q8N144 294 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 GOLGA2P5Q9HBQ8 144 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 SPTLC3Q9NUV7 552 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 MIOSQ9NXC5 875 aa16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 TRMT1Q9NXH9 659 aaKnown RBP16.18■□□□□ 0.18
TMEM39A-203ENST00000461654 CLEC1BQ9P126 229 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms