RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TFAP2CQ92754 450 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 TRIM43Q96BQ3 446 aaPredicted RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 GPR87Q9BY21 358 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 REXO4Q9GZR2 422 aaKnown RBP4.62□□□□□ -1.67
CLK1-206ENST00000461326 CERS4Q9HA82 394 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 PLEKHM1Q9Y4G2 1056 aa4.62□□□□□ -1.67
CLK1-206ENST00000461326 TCRBV7S2A1N4TA0A589 114 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 MBD3L4A6NDZ8 208 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 MBD3L3A6NE82 208 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 POM121BA6NF01 834 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 BTN3A1O00481 513 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 WNT10BO00744 389 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 FAM20BO75063 409 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 ABHD16AO95870 558 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 KLRC1P26715 233 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 RAP2BP61225 183 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 NOMO3P69849 1222 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 CHAF1AQ13111 956 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 UBXN2BQ14CS0 331 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 PRR16Q569H4 304 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 FAM83BQ5T0W9 1011 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 SESTD1Q86VW0 696 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 COL23A1Q86Y22 540 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 VRK3Q8IV63 474 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 SDR16C5Q8N3Y7 309 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 ZNF276Q8N554 614 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 FANCBQ8NB91 859 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 MDGA1Q8NFP4 955 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 OR52N2Q8NGI0 321 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 PROKR1Q8TCW9 393 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 NTN5Q8WTR8 489 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 MOGAT1Q96PD6 335 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 BBC3Q96PG8 261 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 CPPED1Q9BRF8 314 aaPredicted RBP4.61□□□□□ -1.67
CLK1-206ENST00000461326 SLAMF7Q9NQ25 335 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 USP19O94966 1318 aa4.61□□□□□ -1.67
CLK1-206ENST00000461326 A0A1W2PPC4 97 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 F5H423 210 aaPredicted RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 MYO1CO00159 1063 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 THAP12O43422 761 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 CREB3O43889 395 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 FGF18O76093 207 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 SBK3P0C264 359 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 XRCC6P12956 609 aaKnown RBP eCLIP4.6□□□□□ -1.67
CLK1-206ENST00000461326 ITGB6P18564 788 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 WNT3P56703 355 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 TNFAIP2Q03169 654 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 PIGFQ07326 219 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 TCF15Q12870 199 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 ELAVL1Q15717 326 aaKnown RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 FAM214AQ32MH5 1076 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 C4orf46Q504U0 113 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 RABL3Q5HYI8 236 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 FAM209BQ5JX69 171 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 KCNV1Q6PIU1 500 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 RHOUQ7L0Q8 258 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 BEND5Q7L4P6 421 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 BHLHA9Q7RTU4 235 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 UBE3BQ7Z3V4 1068 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 CCDC33Q8N5R6 958 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 NUP133Q8WUM0 1156 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 IQCDQ96DY2 449 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 P2RX7Q99572 595 aaKnown RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 MYOCQ99972 504 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 CNPPD1Q9BV87 410 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 LSM14BQ9BX40 385 aaKnown RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 TINAGL1Q9GZM7 467 aaPredicted RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 A1CFQ9NQ94 594 aaKnown RBP4.6□□□□□ -1.67
CLK1-206ENST00000461326 SACM1LQ9NTJ5 587 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 STK32BQ9NY57 414 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 CPNE7Q9UBL6 633 aa4.6□□□□□ -1.67
CLK1-206ENST00000461326 A0A087WWL8 130 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 KLRG2A4D1S0 409 aaPredicted RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 CDHR4A6H8M9 788 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 CLCA1A8K7I4 914 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 ZNF785A8K8V0 405 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 GOLGA6L6A8MZA4 724 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 DIRC3C9JPN6 131 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 INO80B-WBP1J3KQ70 363 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 APOL1O14791 398 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 STC2O76061 302 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 INMTO95050 263 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 ITGB1P05556 798 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 ANXA2P07355 339 aaKnown RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 GRPP07492 148 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 PIM1P11309 404 aaPredicted RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 CYP2C9P11712 490 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 ZNF37AP17032 561 aaPredicted RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 HDCP19113 662 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 SLC6A4P31645 630 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 PPM1AP35813 382 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 XDHP47989 1333 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 ZNF135P52742 658 aaPredicted RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 SATB1Q01826 763 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 PDCD2Q16342 344 aaPredicted RBP4.59□□□□□ -1.67
CLK1-206ENST00000461326 AMOTQ4VCS5 1084 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 HSP90AB4PQ58FF6 505 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 EPHA10Q5JZY3 1008 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 COLEC12Q5KU26 742 aa4.59□□□□□ -1.67
CLK1-206ENST00000461326 UTP14CQ5TAP6 766 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms