RNA–Protein interactions for RNA: ENST00000460616.5

SSR4-206, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,482 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-206ENST00000460616 ZNF76P36508 570 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 CDK7P50613 346 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 MFAP3P55082 362 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 CDK16Q00536 496 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 GABPAQ06546 454 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 PPP2R5CQ13362 524 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 MYBPC2Q14324 1141 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 ZNF276Q8N554 614 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 SKA1Q96BD8 255 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 DYDC2Q96IM9 177 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 GPRC5DQ9NZD1 345 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 FAM198AQ9UFP1 575 aa16.31■□□□□ 0.2
SSR4-206ENST00000460616 F8W8V4 182 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 ANPEPP15144 967 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 LSAMPQ13449 338 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 LRRC6Q86X45 466 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 ZBED8Q8IZ13 594 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 SMC1BQ8NDV3 1235 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 ZBED3Q96IU2 234 aaPredicted RBP16.3■□□□□ 0.2
SSR4-206ENST00000460616 FAM161BQ96MY7 647 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 ECSITQ9BQ95 431 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 TMEM120AQ9BXJ8 343 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 VPS11Q9H270 941 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 PPCSQ9HAB8 311 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 KCNK13Q9HB14 408 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.3■□□□□ 0.2
SSR4-206ENST00000460616 ZBED4O75132 1171 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 FDX1P10109 184 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 RAP1GDS1P52306 607 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 TCP10LQ8TDR4 215 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 SHC3Q92529 594 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 TSSK1BQ9BXA7 367 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 TUFT1Q9NNX1 390 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 ALG13Q9NP73 1137 aaKnown RBP16.3■□□□□ 0.2
SSR4-206ENST00000460616 IL1RAPL1Q9NZN1 696 aa16.3■□□□□ 0.2
SSR4-206ENST00000460616 TCP10L2B9ZVM9 353 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 DNALI1O14645 258 aaPredicted RBP16.29■□□□□ 0.2
SSR4-206ENST00000460616 PENKP01210 267 aaPredicted RBP16.29■□□□□ 0.2
SSR4-206ENST00000460616 SREBF1P36956 1147 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 GEMIN4P57678 1058 aaKnown RBP16.29■□□□□ 0.2
SSR4-206ENST00000460616 RASA2Q15283 850 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 C1orf220Q5T0J3 134 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 SLC30A10Q6XR72 485 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 PHLDB2Q86SQ0 1253 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 ZNF70Q9UC06 446 aaPredicted RBP16.29■□□□□ 0.2
SSR4-206ENST00000460616 B2RBV5 119 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 ALOX15BO15296 676 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 CHMP2AO43633 222 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 ETS2P15036 469 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 MXI1P50539 228 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 ATRNL1Q5VV63 1379 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 CDAN1Q8IWY9 1227 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 STKLD1Q8NE28 680 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 CCDC110Q8TBZ0 833 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 OLFM3Q96PB7 478 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 IWS1Q96ST2 819 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 TMEM117Q9H0C3 514 aa16.29■□□□□ 0.2
SSR4-206ENST00000460616 C12orf65Q9H3J6 166 aaKnown RBP16.29■□□□□ 0.2
SSR4-206ENST00000460616 TISP43B9A030 160 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 MAGEC1O60732 1142 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 BAG2O95816 211 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 FOSP01100 380 aaPredicted RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 ZSCAN5DPP0CG00 497 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 CRABP2P29373 138 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 CIITAP33076 1130 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 CFAP157Q5JU67 520 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 LCA5Q86VQ0 697 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 ST13P4Q8IZP2 240 aaPredicted RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.28■□□□□ 0.2
SSR4-206ENST00000460616 GLIS1Q8NBF1 620 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 PPP2R3CQ969Q6 453 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 FAM81BQ96LP2 452 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 MIS12Q9H081 205 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 TMCO1Q9UM00 188 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 ATP2A1O14983 1001 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 TM9SF1O15321 606 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 DLDP09622 509 aaKnown RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 HIRAP54198 1017 aaPredicted RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 AP2B1P63010 937 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 NOP14P78316 857 aaKnown RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 PDIA2Q13087 525 aaKnown RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 CCDC142Q17RM4 750 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 CLEC16AQ2KHT3 1053 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 MARK2Q7KZI7 788 aaKnown RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 SH3BP5LQ7L8J4 393 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 NET1Q7Z628 596 aaPredicted RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 TTC7BQ86TV6 843 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 TMPRSS6Q8IU80 811 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 MTMR14Q8NCE2 650 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 DDX1Q92499 740 aaKnown RBP16.28■□□□□ 0.2
SSR4-206ENST00000460616 TTC1Q99614 292 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 STRA6Q9BX79 667 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 NDE1Q9NXR1 346 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 GALNT8Q9NY28 637 aa16.28■□□□□ 0.2
SSR4-206ENST00000460616 SLC17A7Q9P2U7 560 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms