RNA–Protein interactions for RNA: ENST00000460366.5

VPS45-204, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 636 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-204ENST00000460366 CYP3A43Q9HB55 503 aa10.65□□□□□ -0.7
VPS45-204ENST00000460366 FANCLQ9NW38 375 aa10.65□□□□□ -0.7
VPS45-204ENST00000460366 MAFFQ9ULX9 164 aa10.65□□□□□ -0.7
VPS45-204ENST00000460366 SNX9Q9Y5X1 595 aa10.65□□□□□ -0.7
VPS45-204ENST00000460366 CHD9Q3L8U1 2897 aa10.65□□□□□ -0.7
VPS45-204ENST00000460366 PRRC2BQ5JSZ5 2229 aaKnown RBP10.65□□□□□ -0.71
VPS45-204ENST00000460366 LAMA2P24043 3122 aaKnown RBP10.64□□□□□ -0.71
VPS45-204ENST00000460366 PLXNA4Q9HCM2 1894 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 SCN1AP35498 2009 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 BECN2A8MW95 431 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 C2CD2LO14523 706 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 TEX28O15482 410 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 CLASP2O75122 1294 aaKnown RBP10.64□□□□□ -0.71
VPS45-204ENST00000460366 S1PR4O95977 384 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 ADH1BP00325 375 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 WARSP23381 471 aaKnown RBP10.64□□□□□ -0.71
VPS45-204ENST00000460366 TNNC1P63316 161 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 MYL7Q01449 175 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 HYAL1Q12794 435 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 KCNC3Q14003 757 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 SOWAHAQ2M3V2 549 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 CTXN3Q4LDR2 81 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 VWA3BQ502W6 1294 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 OVOS1Q6IE37 1185 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 LILRA6Q6PI73 481 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 PRSS55Q6UWB4 352 aaPredicted RBP10.64□□□□□ -0.71
VPS45-204ENST00000460366 LRSAM1Q6UWE0 723 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 TMEM184AQ6ZMB5 413 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 RTL10Q7L3V2 364 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 ADGRD2Q7Z7M1 963 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 CREBRFQ8IUR6 639 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 AOPEPQ8N6M6 819 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 EFHBQ8N7U6 833 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 ANKRD20A12PQ8NF67 263 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 SLC22A17Q8WUG5 538 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 HDAC7Q8WUI4 952 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 AUTS2Q8WXX7 1259 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 SEMA4DQ92854 862 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 B3GALT6Q96L58 329 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 ANP32EQ9BTT0 268 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 HSD3B7Q9H2F3 369 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 NDST4Q9H3R1 872 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 MMRN2Q9H8L6 949 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 LIMA1Q9UHB6 759 aaKnown RBP10.64□□□□□ -0.71
VPS45-204ENST00000460366 DPP7Q9UHL4 492 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 FBXL5Q9UKA1 691 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 L1RE1Q9UN81 338 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 PCDHGC5Q9Y5F6 944 aa10.64□□□□□ -0.71
VPS45-204ENST00000460366 RNF223E7ERA6 249 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 TPM2P07951 284 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 CDK11BP21127 795 aaKnown RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 KLRC2P26717 231 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 PCSK1P29120 753 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 GGCXP38435 758 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 NRIP1P48552 1158 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 NOP14P78316 857 aaKnown RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 SMARCB1Q12824 385 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 ADAM15Q13444 863 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 CTC1Q2NKJ3 1217 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 MIIPQ5JXC2 388 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 TPGS2Q68CL5 300 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 ADGRF2Q8IZF7 708 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 TTC39CQ8N584 583 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 EHBP1Q8NDI1 1231 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 ZNF461Q8TAF7 563 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 LMO3Q8TAP4 145 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 FAM200AQ8TCP9 573 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 PABPC5Q96DU9 382 aaKnown RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 MMS19Q96T76 1030 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 ACBD6Q9BR61 282 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 TMUB1Q9BVT8 246 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 BCO2Q9BYV7 579 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 NIF3L1Q9GZT8 377 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 TSPY26PQ9H489 355 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 PLEKHA4Q9H4M7 779 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 APOBEC3GQ9HC16 384 aaKnown RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 CBX8Q9HC52 389 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 NXF1Q9UBU9 619 aaKnown RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 TIMM13Q9Y5L4 95 aaPredicted RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 CHD7Q9P2D1 2997 aa10.63□□□□□ -0.71
VPS45-204ENST00000460366 COL4A4P53420 1690 aaPredicted RBP10.63□□□□□ -0.71
VPS45-204ENST00000460366 CUL9Q8IWT3 2517 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 PER2O15055 1255 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 ABLIM3O94929 683 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 SRGAP2BP0DMP2 458 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 OR1D2P34982 312 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 CA8P35219 290 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
VPS45-204ENST00000460366 CLCN4P51793 760 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 TPM4P67936 248 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 GPR17Q13304 367 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 KRT31Q15323 416 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 ELMSAN1Q6PJG2 1045 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 RSPO2Q6UXX9 243 aaPredicted RBP10.62□□□□□ -0.71
VPS45-204ENST00000460366 GBP6Q6ZN66 633 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 RBM23Q86U06 439 aaKnown RBP10.62□□□□□ -0.71
VPS45-204ENST00000460366 UNC93AQ86WB7 457 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 DCP1BQ8IZD4 617 aaKnown RBP10.62□□□□□ -0.71
VPS45-204ENST00000460366 KBTBD7Q8WVZ9 684 aa10.62□□□□□ -0.71
VPS45-204ENST00000460366 CASP10Q92851 521 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms