RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 GABRDO14764 452 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 ECI2O75521 394 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 FGF19O95750 216 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 CST3P01034 146 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-208ENST00000460289 PCSK1P29120 753 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 TRPC3Q13507 836 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 VEPH1Q14D04 833 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 LIMS2Q7Z4I7 341 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 DNAJB7Q7Z6W7 309 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-208ENST00000460289 GUF1Q8N442 669 aaKnown RBP24.67■■□□□ 1.54
PTPN4-208ENST00000460289 TTC9BQ8N6N2 239 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 ST13P5Q8NFI4 369 aaPredicted RBP24.67■■□□□ 1.54
PTPN4-208ENST00000460289 FAM200AQ8TCP9 573 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 PARD3BQ8TEW8 1205 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 ZNF516Q92618 1163 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 FRMD4BQ9Y2L6 1034 aa24.67■■□□□ 1.54
PTPN4-208ENST00000460289 HAPLN1P10915 354 aaPredicted RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 FAM160A1Q05DH4 1040 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 SNW1Q13573 536 aaKnown RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 INTS6LQ5JSJ4 861 aaKnown RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 SIX5Q8N196 739 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 ENGASEQ8NFI3 743 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 MMS19Q96T76 1030 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 LRRC3Q9BY71 257 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 GZF1Q9H116 711 aaPredicted RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 RMND1Q9NWS8 449 aa24.66■■□□□ 1.54
PTPN4-208ENST00000460289 ABI2Q9NYB9 513 aaPredicted RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 CIZ1Q9ULV3 898 aaPredicted RBP24.66■■□□□ 1.54
PTPN4-208ENST00000460289 PHACTR2O75167 634 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 MOSPD3O75425 235 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 SOAT2O75908 522 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 FAM163BP0C2L3 166 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 ATICP31939 592 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 CLCN5P51795 746 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 NUBP1P53384 320 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 CLDN10P78369 228 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 TAF12Q16514 161 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 ASTLQ6HA08 431 aaPredicted RBP24.65■■□□□ 1.54
PTPN4-208ENST00000460289 GPR152Q8TDT2 470 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 ELSPBP1Q96BH3 223 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 TIGD1Q96MW7 591 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 KXD1Q9BQD3 176 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 HOOK1Q9UJC3 728 aaKnown RBP24.65■■□□□ 1.54
PTPN4-208ENST00000460289 MAPK8IP1Q9UQF2 711 aa24.65■■□□□ 1.54
PTPN4-208ENST00000460289 STAU1O95793 577 aaKnown RBP24.64■■□□□ 1.54
PTPN4-208ENST00000460289 ACAT1P24752 427 aaKnown RBP24.64■■□□□ 1.54
PTPN4-208ENST00000460289 RPL13P26373 211 aaKnown RBP24.64■■□□□ 1.54
PTPN4-208ENST00000460289 CASP4P49662 377 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 VCPP55072 806 aaKnown RBP24.64■■□□□ 1.54
PTPN4-208ENST00000460289 GPC5P78333 572 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 PNOCQ13519 176 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 NFIL3Q16649 462 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 CEP135Q66GS9 1140 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 OSTM1Q86WC4 334 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 TMC8Q8IU68 726 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 SYAP1Q96A49 352 aaPredicted RBP24.64■■□□□ 1.54
PTPN4-208ENST00000460289 FAM122AQ96E09 287 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 ZFP14Q9HCL3 533 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 ABCB6Q9NP58 842 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 TMLHEQ9NVH6 421 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 GTF3C4Q9UKN8 822 aa24.64■■□□□ 1.54
PTPN4-208ENST00000460289 ZDBF2Q9HCK1 2354 aa24.64■■□□□ 1.53
PTPN4-208ENST00000460289 LRRIQ3A6PVS8 624 aaPredicted RBP24.63■■□□□ 1.53
PTPN4-208ENST00000460289 MAPK13O15264 365 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 SMC2O95347 1197 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 ATF6P18850 670 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 WARSP23381 471 aaKnown RBP24.63■■□□□ 1.53
PTPN4-208ENST00000460289 CDR1P51861 262 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 TNNC1P63316 161 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 PFKPQ01813 784 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 BIRC3Q13489 604 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 TEAD2Q15562 447 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 WDR72Q3MJ13 1102 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 FAM78AQ5JUQ0 283 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 TANGO2Q6ICL3 276 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 POTEHQ6S545 545 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 FLCNQ8NFG4 579 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 SHKBP1Q8TBC3 707 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 PLEKHO2Q8TD55 490 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 TMC2Q8TDI7 906 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 KBTBD7Q8WVZ9 684 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 SMARCD2Q92925 531 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 ASB16Q96NS5 453 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 GSDMAQ96QA5 445 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 CDH9Q9ULB4 789 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 ZNF318Q5VUA4 2279 aa24.63■■□□□ 1.53
PTPN4-208ENST00000460289 A0A1W2PRU2 124 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 STK25O00506 426 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 IKBKBO14920 756 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 TACC1O75410 805 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 GJA1P17302 382 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 NR2F2P24468 414 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 MAPRE1Q15691 268 aaKnown RBP24.62■■□□□ 1.53
PTPN4-208ENST00000460289 IER5LQ5T953 404 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 ZSWIM3Q96MP5 696 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 PKMYT1Q99640 499 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 LPIN3Q9BQK8 851 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 PI4K2AQ9BTU6 479 aa24.62■■□□□ 1.53
PTPN4-208ENST00000460289 GTPBP4Q9BZE4 634 aaKnown RBP24.62■■□□□ 1.53
PTPN4-208ENST00000460289 SNX25Q9H3E2 840 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 107.4 ms