RNA–Protein interactions for RNA: ENST00000460097.5

CMTM3-203, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2 BASIC

Gene CMTM3, Length 1,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-203ENST00000460097 SELPP16109 830 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 MSH2P43246 934 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 PLTPP55058 493 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.27
CMTM3-203ENST00000460097 SPDYAQ5MJ70 313 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 ZNF618Q5T7W0 954 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 C12orf50Q8NA57 414 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-203ENST00000460097 CKAP2Q8WWK9 683 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 THOC1Q96FV9 657 aaKnown RBP16.71■□□□□ 0.27
CMTM3-203ENST00000460097 BORCS6Q96GS4 357 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 FAM49AQ9H0Q0 323 aaPredicted RBP16.71■□□□□ 0.27
CMTM3-203ENST00000460097 DBR1Q9UK59 544 aaKnown RBP16.71■□□□□ 0.27
CMTM3-203ENST00000460097 DNM3Q9UQ16 869 aa16.71■□□□□ 0.27
CMTM3-203ENST00000460097 MAFO75444 373 aaPredicted RBP16.7■□□□□ 0.26
CMTM3-203ENST00000460097 ATP2A2P16615 1042 aaKnown RBP16.7■□□□□ 0.26
CMTM3-203ENST00000460097 RARRES1P49788 294 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 KCNJ2P63252 427 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 ENOX2Q16206 610 aaKnown RBP16.7■□□□□ 0.26
CMTM3-203ENST00000460097 LRRC8DQ7L1W4 858 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 KIAA0319LQ8IZA0 1049 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 UBL4BQ8N7F7 174 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 SLC7A3Q8WY07 619 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 SPDL1Q96EA4 605 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 NR2E1Q9Y466 385 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 LRRC42Q9Y546 428 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 ACTL7BQ9Y614 415 aa16.7■□□□□ 0.26
CMTM3-203ENST00000460097 RSPH10B2B2RC85 870 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 MTA2O94776 668 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 RSPH10BP0C881 870 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 GCKP35557 465 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 RFC5P40937 340 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 CCNHP51946 323 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 POLGP54098 1239 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 ARSHQ5FYA8 562 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 IER5Q5VY09 327 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 NAIF1Q69YI7 327 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 EP400NLQ6ZTU2 488 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 SPATA21Q7Z572 469 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 EXOC3L1Q86VI1 746 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 LRRC71Q8N4P6 559 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 SCLYQ96I15 445 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 DHX33Q9H6R0 707 aaKnown RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 GCNT4Q9P109 453 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 SNX24Q9Y343 169 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 L3MBTL1Q9Y468 752 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 CEP290O15078 2479 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 IGKV6-21A0A0C4DH24 114 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 DIAPH2O60879 1101 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 PARNO95453 639 aaKnown RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 EYA4O95677 639 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 CSF2RAP15509 400 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 MAGEA10P43363 369 aaPredicted RBP16.69■□□□□ 0.26
CMTM3-203ENST00000460097 CLCN3P51790 818 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 FPGSQ05932 587 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 PRELID2Q8N945 189 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 TMEM237Q96Q45 408 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 SEMA4AQ9H3S1 761 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 TXLNGQ9NUQ3 528 aa16.69■□□□□ 0.26
CMTM3-203ENST00000460097 ARHGEF35A5YM69 484 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 E9PMD0 336 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 AHCYL1O43865 530 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 DGAT1O75907 488 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 AKAP3O75969 853 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 NR3C1P04150 777 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 FESP07332 822 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 CTSHP09668 335 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 RPL21P46778 160 aaKnown RBP16.68■□□□□ 0.26
CMTM3-203ENST00000460097 GIT2Q14161 759 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 FAM26DQ5JW98 314 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 ANKRD20A2Q5SQ80 823 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 ANKRD20A1Q5TYW2 823 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 ANKRD20A3Q5VUR7 823 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 LINC01465Q8N7H1 131 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 SYT2Q8N9I0 419 aaPredicted RBP16.68■□□□□ 0.26
CMTM3-203ENST00000460097 TRIM31Q9BZY9 425 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 BHMT2Q9H2M3 363 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 ERVK-5Q9HDB9 667 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 ADAM22Q9P0K1 906 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 WHRNQ9P202 907 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 AKT3Q9Y243 479 aa16.68■□□□□ 0.26
CMTM3-203ENST00000460097 TLDC2A0PJX2 215 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 KLHL33A6NCF5 533 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 M0QZ92 97 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 EIF3DO15371 548 aaKnown RBP eCLIP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 GAS2O43903 313 aaKnown RBP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 UNC5CO95185 931 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 CHRNA1P02708 482 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 RFC2P35250 354 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 HOXD13P35453 343 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 MRPS6P82932 125 aaKnown RBP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 TMEM62Q0P6H9 643 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 PPIGQ13427 754 aaKnown RBP eCLIP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 TRAF7Q6Q0C0 670 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 SYDE1Q6ZW31 735 aaPredicted RBP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 RPUSD2Q8IZ73 545 aaKnown RBP16.67■□□□□ 0.26
CMTM3-203ENST00000460097 OSGEPQ9NPF4 335 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 LGALS13Q9UHV8 139 aa16.67■□□□□ 0.26
CMTM3-203ENST00000460097 MTUS1Q9ULD2 1270 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms