RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 ASB16Q96NS5 453 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 LRRC3Q9BY71 257 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 DNAJC25Q9H1X3 360 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 TRPV4Q9HBA0 871 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 ABCB6Q9NP58 842 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 DDX43Q9NXZ2 648 aaKnown RBP23.06■■□□□ 1.28
CCDC78-205ENST00000460023 SIX4Q9UIU6 781 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 CA14Q9ULX7 337 aa23.06■■□□□ 1.28
CCDC78-205ENST00000460023 PDXKO00764 312 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 HOXD11P31277 338 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-205ENST00000460023 CCR2P41597 374 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 CYP2J2P51589 502 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 CYP24A1Q07973 514 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 TCF15Q12870 199 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 STK4Q13043 487 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 TAF12Q16514 161 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 FAM78AQ5JUQ0 283 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 TRAPPC11Q7Z392 1133 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 LRRTM3Q86VH5 581 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 GRAMD1CQ8IYS0 662 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 OR5B17Q8NGF7 314 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 FAM200AQ8TCP9 573 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 DEPDC1BQ8WUY9 529 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 CGRRF1Q99675 332 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 SEPT5Q99719 369 aaPredicted RBP23.05■■□□□ 1.28
CCDC78-205ENST00000460023 KXD1Q9BQD3 176 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 L1RE1Q9UN81 338 aa23.05■■□□□ 1.28
CCDC78-205ENST00000460023 GABRDO14764 452 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 DLATP10515 647 aaKnown RBP23.04■■□□□ 1.28
CCDC78-205ENST00000460023 HAPLN1P10915 354 aaPredicted RBP23.04■■□□□ 1.28
CCDC78-205ENST00000460023 NDUFA8P51970 172 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 SLC44A4Q53GD3 710 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 ARHGAP15Q53QZ3 475 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 TANGO2Q6ICL3 276 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 TMC8Q8IU68 726 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 DNASE1L2Q92874 299 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 NELL2Q99435 816 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 TBC1D17Q9HA65 648 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 SIT1Q9Y3P8 196 aa23.04■■□□□ 1.28
CCDC78-205ENST00000460023 TSC2P49815 1807 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 SOBPA7XYQ1 873 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 MOSPD3O75425 235 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 RPN1P04843 607 aaKnown RBP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 PSMC3P17980 439 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 CDC25CP30307 473 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 MAPRE1Q15691 268 aaKnown RBP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 INTS6LQ5JSJ4 861 aaKnown RBP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 LIMS2Q7Z4I7 341 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 ADGRF2Q8IZF7 708 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 FSIP1Q8NA03 581 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 IRF7Q92985 503 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 CCDC127Q96BQ5 260 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 FUBP3Q96I24 572 aaKnown RBP eCLIP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 GCNAQ96QF7 691 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 TRMT61BQ9BVS5 477 aaKnown RBP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 OSBPL6Q9BZF3 934 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 SLITRK6Q9H5Y7 841 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 TRPV5Q9NQA5 729 aa23.03■■□□□ 1.28
CCDC78-205ENST00000460023 ABI2Q9NYB9 513 aaPredicted RBP23.03■■□□□ 1.28
CCDC78-205ENST00000460023 A0A1W2PRU2 124 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 RHOBTB3O94955 611 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 STAU1O95793 577 aaKnown RBP23.02■■□□□ 1.28
CCDC78-205ENST00000460023 WEE1P30291 646 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 ATICP31939 592 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 RPL10AP62906 217 aaKnown RBP23.02■■□□□ 1.28
CCDC78-205ENST00000460023 TRPC3Q13507 836 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 TEAD2Q15562 447 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 MLF2Q15773 248 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-205ENST00000460023 SOWAHAQ2M3V2 549 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 LMBRD2Q68DH5 695 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-205ENST00000460023 KRBA2Q6ZNG9 492 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 CCDC105Q8IYK2 499 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 KIAA0895Q8NCT3 520 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 SHKBP1Q8TBC3 707 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 ZSCAN18Q8TBC5 510 aaPredicted RBP23.02■■□□□ 1.28
CCDC78-205ENST00000460023 ATXN3LQ9H3M9 355 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 DMAC2Q9NW81 257 aa23.02■■□□□ 1.28
CCDC78-205ENST00000460023 KANSL1LA0AUZ9 987 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 GOLGA6L4A6NEF3 574 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 PI15O43692 258 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CALUO43852 315 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 ZNF202O95125 648 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CSH1P0DML2 217 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CSH2P0DML3 217 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 FCARP24071 287 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 SNW1Q13573 536 aaKnown RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 KCNB1Q14721 858 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CFAP221Q4G0U5 840 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 C4orf50Q6ZRC1 276 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 MFSD6LQ8IWD5 586 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 ST13P5Q8NFI4 369 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 ATOH1Q92858 354 aaPredicted RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CEP295NLQ96MC4 621 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 DDX23Q9BUQ8 820 aaKnown RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 KCTD10Q9H3F6 313 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 BRD9Q9H8M2 597 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 OBP2AQ9NY56 170 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 CDH9Q9ULB4 789 aa23.01■■□□□ 1.27
CCDC78-205ENST00000460023 MRPS17Q9Y2R5 130 aaKnown RBP23.01■■□□□ 1.27
CCDC78-205ENST00000460023 PTPRJQ12913 1337 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms