RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 RHOBTB3O94955 611 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 FGF19O95750 216 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 PRR29P0C7W0 189 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 NPR3P17342 541 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 LHX1P48742 406 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 DPYDQ12882 1025 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 VEPH1Q14D04 833 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 MGAT5BQ3V5L5 792 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 TMC8Q8IU68 726 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 SLC9A9Q8IVB4 645 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 ADGRF2Q8IZF7 708 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 FLCNQ8NFG4 579 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 ELSPBP1Q96BH3 223 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 LRRC3Q9BY71 257 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 GPR88Q9GZN0 384 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 KCTD10Q9H3F6 313 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 DMAC2Q9NW81 257 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 PCDHB5Q9Y5E4 795 aa17.31■□□□□ 0.36
COL7A1-203ENST00000459756 KRBA1A5PL33 1030 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 GOLGA6L4A6NEF3 574 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 GABRDO14764 452 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 MOSPD3O75425 235 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 SOAT2O75908 522 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 PCSK1P29120 753 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 GPC5P78333 572 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 SOWAHAQ2M3V2 549 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 FAM78AQ5JUQ0 283 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 CWF19L1Q69YN2 538 aaKnown RBP17.3■□□□□ 0.36
COL7A1-203ENST00000459756 POTEHQ6S545 545 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 LIMS2Q7Z4I7 341 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 DNAJB7Q7Z6W7 309 aaPredicted RBP17.3■□□□□ 0.36
COL7A1-203ENST00000459756 TMEM105Q8N8V8 129 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 ASB16Q96NS5 453 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 GZF1Q9H116 711 aaPredicted RBP17.3■□□□□ 0.36
COL7A1-203ENST00000459756 ZFP14Q9HCL3 533 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 ARHGEF3Q9NR81 526 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 ABI2Q9NYB9 513 aaPredicted RBP17.3■□□□□ 0.36
COL7A1-203ENST00000459756 CA14Q9ULX7 337 aa17.3■□□□□ 0.36
COL7A1-203ENST00000459756 NR3C1P04150 777 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 HAPLN1P10915 354 aaPredicted RBP17.29■□□□□ 0.36
COL7A1-203ENST00000459756 ATF6P18850 670 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 AOC1P19801 751 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 FCARP24071 287 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 AP3M2P53677 418 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 PTPN5P54829 565 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 PFKPQ01813 784 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 KCNB1Q14721 858 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 TEAD2Q15562 447 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 INTS6LQ5JSJ4 861 aaKnown RBP17.29■□□□□ 0.36
COL7A1-203ENST00000459756 TANGO2Q6ICL3 276 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 PRSS33Q8NF86 280 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 SHKBP1Q8TBC3 707 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 FAM200AQ8TCP9 573 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 SMARCD2Q92925 531 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 ZSWIM3Q96MP5 696 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 TMLHEQ9NVH6 421 aa17.29■□□□□ 0.36
COL7A1-203ENST00000459756 A0A1W2PRU2 124 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 NRG2O14511 850 aaPredicted RBP17.28■□□□□ 0.36
COL7A1-203ENST00000459756 CALUO43852 315 aaPredicted RBP17.28■□□□□ 0.36
COL7A1-203ENST00000459756 GJA1P17302 382 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 RFX1P22670 979 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 ACAT1P24752 427 aaKnown RBP17.28■□□□□ 0.36
COL7A1-203ENST00000459756 CLDN10P78369 228 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 TRPC3Q13507 836 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 PHLDB3Q6NSJ2 640 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 OSTM1Q86WC4 334 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 FMR1NBQ8N0W7 255 aaPredicted RBP17.28■□□□□ 0.36
COL7A1-203ENST00000459756 PARD3BQ8TEW8 1205 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 ZNF516Q92618 1163 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 SHDQ96IW2 340 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 PKMYT1Q99640 499 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 LPIN3Q9BQK8 851 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 SLITRK6Q9H5Y7 841 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 TRPV4Q9HBA0 871 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 ZNF334Q9HCZ1 680 aaPredicted RBP17.28■□□□□ 0.36
COL7A1-203ENST00000459756 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
COL7A1-203ENST00000459756 STK25O00506 426 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 GALR2O43603 387 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 STAU1O95793 577 aaKnown RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 CST3P01034 146 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 FAM163BP0C2L3 166 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 WARSP23381 471 aaKnown RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 CASP4P49662 377 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 CDR1P51861 262 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 NHLH1Q02575 133 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 TAF12Q16514 161 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 GAREM2Q75VX8 874 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 GUF1Q8N442 669 aaKnown RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 ZSCAN18Q8TBC5 510 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.36
COL7A1-203ENST00000459756 MMS19Q96T76 1030 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 PLA2G2FQ9BZM2 168 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 IRF2BPLQ9H1B7 796 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 TBC1D17Q9HA65 648 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 GTF3C4Q9UKN8 822 aa17.27■□□□□ 0.36
COL7A1-203ENST00000459756 PHACTR2O75167 634 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 GABRR2P28476 465 aa17.26■□□□□ 0.35
COL7A1-203ENST00000459756 CDC25CP30307 473 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms