RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 C11orf63Q6NUN7 778 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 DAAM2Q86T65 1068 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 OR6B3Q8NGW1 331 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 ZNF564Q8TBZ8 553 aaPredicted RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 C11orf70Q9BRQ4 267 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 ELAC1Q9H777 363 aaKnown RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 TMEM161AQ9NX61 479 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 INPP5FQ9Y2H2 1132 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 CALB1P05937 261 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 HSPA1AP0DMV8 641 aaKnown RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 HSPA1BP0DMV9 641 aaKnown RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 CAPN2P17655 700 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 TCP1P17987 556 aaKnown RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 WARSP23381 471 aaKnown RBP25.93■■□□□ 1.74
U2AF1-204ENST00000459639 PAX3P23760 479 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 UPP1Q16831 310 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 DENND1BQ6P3S1 775 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 ADGRF2Q8IZF7 708 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 SNX25Q9H3E2 840 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 NME7Q9Y5B8 376 aa25.93■■□□□ 1.74
U2AF1-204ENST00000459639 TSC2P49815 1807 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 CASTOR2A6NHX0 329 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 NCK2O43639 380 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 MICAL2O94851 1124 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 CXCL10P02778 98 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 RRM1P23921 792 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 MMS22LQ6ZRQ5 1243 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 WDTC1Q8N5D0 677 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 TET1Q8NFU7 2136 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 WNT8AQ9H1J5 351 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 ABCB6Q9NP58 842 aa25.92■■□□□ 1.74
U2AF1-204ENST00000459639 UQCRHLA0A096LP55 91 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 A8MXQ7 604 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 CYB561D2O14569 222 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 UQCRHP07919 91 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 AARSP49588 968 aaKnown RBP eCLIP25.91■■□□□ 1.74
U2AF1-204ENST00000459639 LCLAT1Q6UWP7 414 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 PEX26Q7Z412 305 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 PDCL2Q8N4E4 241 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 URGCPQ8TCY9 931 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 CARD6Q9BX69 1037 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 C11orf49Q9H6J7 331 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 CACNG4Q9UBN1 327 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 TBX21Q9UL17 535 aa25.91■■□□□ 1.74
U2AF1-204ENST00000459639 ENPP3O14638 875 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 FGFR1P11362 822 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 GNL1P36915 607 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-204ENST00000459639 CLLU1OSQ5K130 101 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 ACOT1Q86TX2 421 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 NT5DC3Q86UY8 548 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 CRYBG2Q8N1P7 616 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 CEP112Q8N8E3 955 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 C3orf58Q8NDZ4 430 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 MNS1Q8NEH6 495 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 UBE2Q2Q8WVN8 375 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 SCLYQ96I15 445 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 SENP8Q96LD8 212 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 OSBPL9Q96SU4 736 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 PPP1R12CQ9BZL4 782 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 STXBP5LQ9Y2K9 1186 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 SCINQ9Y6U3 715 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 M0QYV0 167 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 NOMO2Q5JPE7 1267 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 ERICH1Q86X53 443 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 GOLPH3Q9H4A6 298 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 MRPL47Q9HD33 250 aaKnown RBP25.9■■□□□ 1.74
U2AF1-204ENST00000459639 KANSL3Q9P2N6 904 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 CHORDC1Q9UHD1 332 aaPredicted RBP25.9■■□□□ 1.74
U2AF1-204ENST00000459639 AMFRQ9UKV5 643 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 ATP11BQ9Y2G3 1177 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 MICAL3Q7RTP6 2002 aa25.9■■□□□ 1.74
U2AF1-204ENST00000459639 CEP350Q5VT06 3117 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 CTIFO43310 598 aaKnown RBP25.89■■□□□ 1.73
U2AF1-204ENST00000459639 KIF4AO95239 1232 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 RPS6KA1Q15418 735 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 ARHGAP17Q68EM7 881 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 PLEKHA7Q6IQ23 1121 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 TMEM86AQ8N2M4 240 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 MSANTD4Q8NCY6 345 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 TSPAN16Q9UKR8 245 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 STRIP2Q9ULQ0 834 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 TTC3P53804 2025 aa25.89■■□□□ 1.73
U2AF1-204ENST00000459639 SRGAP2O75044 1071 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 CCL23P55773 120 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 DSTYKQ6XUX3 929 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 OSTM1Q86WC4 334 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 TNIP3Q96KP6 325 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 PAAF1Q9BRP4 392 aa25.88■■□□□ 1.73
U2AF1-204ENST00000459639 GABRDO14764 452 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 GPD2P43304 727 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 CKAP4Q07065 602 aaKnown RBP25.87■■□□□ 1.73
U2AF1-204ENST00000459639 C2CD6Q53TS8 623 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 C12orf29Q8N999 325 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 SPATA18Q8TC71 538 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 PAWRQ96IZ0 340 aaKnown RBP25.87■■□□□ 1.73
U2AF1-204ENST00000459639 DPEP3Q9H4B8 488 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 PARVAQ9NVD7 372 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 PACSIN2Q9UNF0 486 aaPredicted RBP25.87■■□□□ 1.73
U2AF1-204ENST00000459639 CLTBP09497 229 aa25.87■■□□□ 1.73
U2AF1-204ENST00000459639 IGFBP6P24592 240 aaPredicted RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms