RNA–Protein interactions for RNA: ENST00000459628.5

GPHN-202, Transcript of gephyrin, humanhuman

TSL 2 BASIC

Gene GPHN, Length 1,723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-202ENST00000459628 PALB2Q86YC2 1186 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 GPIHBP1Q8IV16 184 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 LPIN3Q9BQK8 851 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 EMILIN2Q9BXX0 1053 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 DNAJC12Q9UKB3 198 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 MTCL1Q9Y4B5 1905 aaKnown RBP13.56□□□□□ -0.24
GPHN-202ENST00000459628 GABRDO14764 452 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 LILRB3O75022 631 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 ATP2C2O75185 946 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 KRT5P13647 590 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 KLRC2P26717 231 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 USP8P40818 1118 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 NRIP1P48552 1158 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 MFAP3P55082 362 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 POLR2FP61218 127 aaKnown RBP13.56□□□□□ -0.24
GPHN-202ENST00000459628 TSPY1Q01534 308 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 GCNT1Q02742 428 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 CREMQ03060 361 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 PDE12Q6L8Q7 609 aaKnown RBP13.56□□□□□ -0.24
GPHN-202ENST00000459628 GPR153Q6NV75 609 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 DPY19L2P1Q6NXN4 242 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 PGLYRP2Q96PD5 576 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 KLHL5Q96PQ7 755 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 TWNKQ96RR1 684 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 CDX2Q99626 313 aaPredicted RBP13.56□□□□□ -0.24
GPHN-202ENST00000459628 SYT15Q9BQS2 421 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 CLSTN3Q9BQT9 956 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 GANQ9H2C0 597 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 IGFLR1Q9H665 355 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 NLRC4Q9NPP4 1024 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.56□□□□□ -0.24
GPHN-202ENST00000459628 STXBP5LQ9Y2K9 1186 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 PCDHB4Q9Y5E5 795 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 MTCH2Q9Y6C9 303 aa13.56□□□□□ -0.24
GPHN-202ENST00000459628 PTPRDP23468 1912 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 OR6C75A6NL08 312 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 CILPO75339 1184 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 NOL4O94818 638 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 SPATA31D3P0C874 917 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 PNMA6AP0CW24 399 aaPredicted RBP13.55□□□□□ -0.24
GPHN-202ENST00000459628 UCHL3P15374 230 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 PCSK1P29120 753 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 GTF2F1P35269 517 aaKnown RBP eCLIP13.55□□□□□ -0.24
GPHN-202ENST00000459628 NDUFV1P49821 464 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 YWHAEP62258 255 aaKnown RBP13.55□□□□□ -0.24
GPHN-202ENST00000459628 INCA1Q0VD86 236 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 SLC39A12Q504Y0 691 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 TCEAL5Q5H9L2 206 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 LLGL2Q6P1M3 1020 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 SPATA31D4Q6ZUB0 917 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 ACOT1Q86TX2 421 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 GUCD1Q96NT3 240 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 ELOVL4Q9GZR5 314 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 NSUN3Q9H649 340 aaKnown RBP13.55□□□□□ -0.24
GPHN-202ENST00000459628 TLE6Q9H808 572 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 RXFP1Q9HBX9 757 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 PLCB1Q9NQ66 1216 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 FNIP2Q9P278 1114 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 BARX2Q9UMQ3 279 aaPredicted RBP13.55□□□□□ -0.24
GPHN-202ENST00000459628 BACE2Q9Y5Z0 518 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 IRAK3Q9Y616 596 aa13.55□□□□□ -0.24
GPHN-202ENST00000459628 A0A1W2PQC6 194 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 TBC1D4O60343 1298 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 CALCAP01258 141 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 ADH1AP07327 375 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 TRIM21P19474 475 aaKnown RBP13.54□□□□□ -0.24
GPHN-202ENST00000459628 ROR1Q01973 937 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 UVSSAQ2YD98 709 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 MDH1BQ5I0G3 518 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 INTS6LQ5JSJ4 861 aaKnown RBP13.54□□□□□ -0.24
GPHN-202ENST00000459628 SARM1Q6SZW1 724 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 TMEM270Q6UE05 265 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 ACBD6Q9BR61 282 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 NT5C1AQ9BXI3 368 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 GTF3C4Q9UKN8 822 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 CDH9Q9ULB4 789 aa13.54□□□□□ -0.24
GPHN-202ENST00000459628 WDR27A2RRH5 827 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 CLASP2O75122 1294 aaKnown RBP13.53□□□□□ -0.24
GPHN-202ENST00000459628 FOSL2P15408 326 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 ACO1P21399 889 aaKnown RBP13.53□□□□□ -0.24
GPHN-202ENST00000459628 RBM10P98175 930 aaKnown RBP13.53□□□□□ -0.24
GPHN-202ENST00000459628 DRAP1Q14919 205 aaPredicted RBP13.53□□□□□ -0.24
GPHN-202ENST00000459628 SLC8B1Q6J4K2 584 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 RNF19BQ6ZMZ0 732 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 ENOSF1Q7L5Y1 443 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 LRRTM3Q86VH5 581 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 UBR7Q8N806 425 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 RBBP8NLQ8NC74 664 aaPredicted RBP13.53□□□□□ -0.24
GPHN-202ENST00000459628 B3GALNT2Q8NCR0 500 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 WHAMMQ8TF30 809 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 FAXDC2Q96IV6 333 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 ZCWPW1Q9H0M4 648 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 CRTAC1Q9NQ79 661 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 FAM49BQ9NUQ9 324 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 TMLHEQ9NVH6 421 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 MYBPHLA2RUH7 354 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 GOLGA6L3A6NEY3 463 aa13.53□□□□□ -0.24
GPHN-202ENST00000459628 FAM163BP0C2L3 166 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms